RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 NOP53Q9NZM5 478 aaKnown RBP1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 CALML5Q9NZT1 146 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 P2RX2Q9UBL9 471 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 FBLN5Q9UBX5 448 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 GIMAP2Q9UG22 337 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 IL19Q9UHD0 177 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 VPREB3Q9UKI3 123 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 EMCNQ9ULC0 261 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 EPB41L3Q9Y2J2 1087 aaPredicted RBP1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 IFT52Q9Y366 437 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 CAB39Q9Y376 341 aaPredicted RBP1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 FAM96BQ9Y3D0 163 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 USH1CQ9Y6N9 552 aa1.97□□□□□ -2.09
RNU4-53P-201ENST00000410828 EPPK1P58107 5090 aaKnown RBP1.96□□□□□ -2.09
RNU4-53P-201ENST00000410828 RYR2Q92736 4967 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 DNAH9Q9NYC9 4486 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 IGKV1D-42A0A075B6H8 117 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 A0A0G2JPF8 293 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 A0A0U1RQK1 487 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 A0A1B0GWA3 101 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 A0A1W2PPM1 405 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 TMEM247A6NEH6 219 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 CCDC154A6NI56 674 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 LRRC30A6NM36 301 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 HNRNPCL2B2RXH8 293 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 TMEM233B4DJY2 109 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 HNRNPCL3B7ZW38 293 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 C22orf46C9J442 243 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 E9PQ18 207 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 C11orf98E9PRG8 122 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 PLPP3O14495 311 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 COPEO14579 308 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 RNF13O43567 381 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ICMTO60725 284 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 HNRNPCL1O60812 293 aaKnown RBP1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ZNF205O95201 554 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 DUS4LO95620 317 aaKnown RBP1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 FSTL3O95633 263 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 KRT75O95678 551 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ABHD16AO95870 558 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 MT-ATP6P00846 226 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 IGHG1P01857 330 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 BGLAPP02818 100 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 BCHEP06276 602 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 CHRNGP07510 517 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ABHD2P08910 425 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 MMP7P09237 267 aaPredicted RBP1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 QDPRP09417 244 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 FBP1P09467 338 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 NHLRC4P0CG21 123 aaPredicted RBP1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 HNRNPCL4P0DMR1 293 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ADORA3P0DMS8 318 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 IRF2P14316 349 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ZNF32P17041 273 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 CD33P20138 364 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 TUBG1P23258 451 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 EEF1B2P24534 225 aaKnown RBP1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 GCAP28676 217 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 S100A3P33764 101 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 PSMB10P40306 273 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 WNT5AP41221 380 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 KIR2DS4P43632 304 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 SRP9P49458 86 aaKnown RBP1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 NPY4RP50391 375 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 MMP16P51512 607 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ZNF84P51523 738 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 EFNB2P52799 333 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 CLNS1AP54105 237 aaKnown RBP1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 CLRN1P58418 232 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 NCALDP61601 193 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 HOXC5Q00444 222 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 EMX2Q04743 252 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 LRRC74AQ0VAA2 488 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 DBPQ10586 325 aaPredicted RBP1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 COX10Q12887 443 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 PSG7Q13046 419 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 HNRNPA0Q13151 305 aaKnown RBP1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 CASP8Q14790 479 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 TAF11Q15544 211 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ZNF181Q2M3W8 571 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 DPY19L1Q2PZI1 675 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 C11orf91Q3C1V1 193 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ZNF404Q494X3 552 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 RUNDC3AQ59EK9 446 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 TMEM255AQ5JRV8 349 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 SPANXN4Q5MJ08 99 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 CEP85LQ5SZL2 805 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 FAM91A1Q658Y4 838 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 C8orf74Q6P047 294 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 PGBD2Q6P3X8 592 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ULK3Q6PHR2 472 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 DCDC5Q6ZRR9 648 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 ZNF621Q6ZSS3 439 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 RFPL4BQ6ZWI9 263 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 SLC35D2Q76EJ3 337 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 TRMT10CQ7L0Y3 403 aaKnown RBP1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 HDDC2Q7Z4H3 204 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 SERPINA11Q86U17 422 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 NDUFA11Q86Y39 141 aa1.96□□□□□ -2.1
RNU4-53P-201ENST00000410828 NUDCD3Q8IVD9 361 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms