RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TEAD1P28347 426 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 BTDP43251 543 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 PRLHRP49683 370 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 PRELPP51888 382 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 SUB1P53999 127 aaKnown RBP eCLIP3.86□□□□□ -1.792e-7■■■■□ 24.9
LSM5-205ENST00000409952 DLX5P56178 289 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 UNC119Q13432 240 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 CYLC2Q14093 348 aaPredicted RBP3.86□□□□□ -1.79
LSM5-205ENST00000409952 DMC1Q14565 340 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 OR4D1Q15615 310 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 FAM182AQ5T1J6 154 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 DUPD1Q68J44 220 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 WDR74Q6RFH5 385 aaPredicted RBP3.86□□□□□ -1.79
LSM5-205ENST00000409952 SSX6Q7RTT6 188 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 ZNF571Q7Z3V5 609 aaPredicted RBP3.86□□□□□ -1.79
LSM5-205ENST00000409952 TMEM150AQ86TG1 271 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 SETD3Q86TU7 594 aaPredicted RBP3.86□□□□□ -1.79
LSM5-205ENST00000409952 C12orf56Q8IXR9 622 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 CCDC71LQ8N9Z2 235 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 NECAP1Q8NC96 275 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 DUSP18Q8NEJ0 188 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 VN1R2Q8NFZ6 395 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 OR2L8Q8NGY9 312 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 TMEM54Q969K7 222 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 DNAJC1Q96KC8 554 aaKnown RBP3.86□□□□□ -1.79
LSM5-205ENST00000409952 UQCC2Q9BRT2 126 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 CHCHD5Q9BSY4 110 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 CALN1Q9BXU9 219 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 HES7Q9BYE0 225 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 CHRNA10Q9GZZ6 450 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 NSRP1Q9H0G5 558 aaKnown RBP3.86□□□□□ -1.79
LSM5-205ENST00000409952 UPF3AQ9H1J1 476 aaKnown RBP3.86□□□□□ -1.79
LSM5-205ENST00000409952 SAV1Q9H4B6 383 aaPredicted RBP3.86□□□□□ -1.79
LSM5-205ENST00000409952 ZNF556Q9HAH1 456 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 DPM3Q9P2X0 92 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 MUTYHQ9UIF7 546 aa3.86□□□□□ -1.79
LSM5-205ENST00000409952 ZNF256Q9Y2P7 627 aaPredicted RBP3.86□□□□□ -1.79
LSM5-205ENST00000409952 A0A087X002 238 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 A0A0A6YYH2 397 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 RBMY1BA6NDE4 496 aaKnown RBP3.85□□□□□ -1.79
LSM5-205ENST00000409952 RBMY1EA6NEQ0 496 aaKnown RBP3.85□□□□□ -1.79
LSM5-205ENST00000409952 FABP12A6NFH5 140 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 A6NJ64 397 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 ERVV-1B6SEH8 477 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 E9PAM4 449 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 F6UB75 175 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 SMLR1H3BR10 107 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 K7EMT4 169 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 CDX4O14627 284 aaPredicted RBP3.85□□□□□ -1.79
LSM5-205ENST00000409952 ERI3O43414 337 aaKnown RBP3.85□□□□□ -1.79
LSM5-205ENST00000409952 RAD51CO43502 376 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 IDH3BO43837 385 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 ICOSLGO75144 302 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 ARG1P05089 322 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 MELTFP08582 738 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 RBMY1DP0C7P1 496 aaKnown RBP3.85□□□□□ -1.79
LSM5-205ENST00000409952 SLC35E2BP0CK96 405 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 RBMY1A1P0DJD3 496 aaKnown RBP3.85□□□□□ -1.79
LSM5-205ENST00000409952 CSNK2A2P19784 350 aaPredicted RBP3.85□□□□□ -1.79
LSM5-205ENST00000409952 RAB4AP20338 218 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 CXCR2P25025 360 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 KDELR2P33947 212 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 RANBP1P43487 201 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 GPR6P46095 362 aaPredicted RBP3.85□□□□□ -1.79
LSM5-205ENST00000409952 KLK7P49862 253 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 SERPINB8P50452 374 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 RORCP51449 518 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 STX17P56962 302 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 TAS2R60P59551 318 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 UBE2KP61086 200 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 ERVK11-1P61568 191 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 ACVR1Q04771 509 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 BCL2L1Q07817 233 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 C2orf80Q0P641 193 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 PDIA2Q13087 525 aaKnown RBP3.85□□□□□ -1.79
LSM5-205ENST00000409952 ITGB3BPQ13352 177 aaPredicted RBP3.85□□□□□ -1.79
LSM5-205ENST00000409952 SLC39A6Q13433 755 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 LY6DQ14210 128 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 MAD2L1BPQ15013 274 aaPredicted RBP3.85□□□□□ -1.79
LSM5-205ENST00000409952 TAL2Q16559 108 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 KCTD19Q17RG1 926 aaPredicted RBP3.85□□□□□ -1.79
LSM5-205ENST00000409952 CDKL4Q5MAI5 379 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 TPTE2P1Q5T6R2 138 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 WDR82Q6UXN9 313 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 PRSS41Q7RTY9 318 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 CRLF3Q8IUI8 442 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 OR10G3Q8NGC4 313 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 OR2A1Q8NGT9 310 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 OR10R2Q8NGX6 335 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 CCDC26Q8TAB7 109 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 UBA3Q8TBC4 463 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 MRAPQ8TCY5 172 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 VN1R17PQ8TDU5 208 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 RASL10AQ92737 203 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 PIK3IP1Q96FE7 263 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 MED8Q96G25 268 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 SLC45A3Q96JT2 553 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 ZNF597Q96LX8 424 aa3.85□□□□□ -1.79
LSM5-205ENST00000409952 ZNF75AQ96N20 296 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms