RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 SRP9P49458 86 aaKnown RBP17.98■□□□□ 0.47
USP39-204ENST00000409766 CATSPERDQ86XM0 798 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 DNAAF1Q8NEP3 725 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 ST7LQ8TDW4 575 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 SLC25A43Q8WUT9 341 aaPredicted RBP17.98■□□□□ 0.47
USP39-204ENST00000409766 SLC7A6Q92536 515 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 ZBTB8AQ96BR9 441 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 NTNG2Q96CW9 530 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 ANGPTL4Q9BY76 406 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 CDCP1Q9H5V8 836 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 ZNF160Q9HCG1 818 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 RABL2AQ9UBK7 228 aaPredicted RBP17.98■□□□□ 0.47
USP39-204ENST00000409766 POU2F3Q9UKI9 436 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 RABL2BQ9UNT1 228 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 CACNG2Q9Y698 323 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 NSG1A0A0A6YYJ2 146 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 GSTZ1O43708 216 aaPredicted RBP17.98■□□□□ 0.47
USP39-204ENST00000409766 SRSF10O75494 262 aaKnown RBP17.98■□□□□ 0.47
USP39-204ENST00000409766 HRGP04196 525 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 BTCP35070 178 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 ZNF528Q3MIS6 628 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 TBRG1Q3YBR2 411 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 PLA1AQ53H76 456 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 DCAF12Q5T6F0 453 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 KRT74Q7RTS7 529 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 DCXRQ7Z4W1 244 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 DND1Q8IYX4 353 aaKnown RBP17.98■□□□□ 0.47
USP39-204ENST00000409766 PROK2Q9HC23 129 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 KLHL9Q9P2J3 617 aa17.98■□□□□ 0.47
USP39-204ENST00000409766 STK17BO94768 372 aa17.97■□□□□ 0.47
USP39-204ENST00000409766 MAS1P04201 325 aa17.97■□□□□ 0.47
USP39-204ENST00000409766 CCL3P10147 92 aa17.97■□□□□ 0.47
USP39-204ENST00000409766 FKBP2P26885 142 aaKnown RBP17.97■□□□□ 0.47
USP39-204ENST00000409766 SSR4P51571 173 aa17.97■□□□□ 0.47
USP39-204ENST00000409766 NKX2-5P52952 324 aaPredicted RBP17.97■□□□□ 0.47
USP39-204ENST00000409766 PRSS45Q7RTY3 260 aa17.97■□□□□ 0.47
USP39-204ENST00000409766 UEVLDQ8IX04 471 aa17.97■□□□□ 0.47
USP39-204ENST00000409766 IZUMO1Q8IYV9 350 aa17.97■□□□□ 0.47
USP39-204ENST00000409766 UBASH3BQ8TF42 649 aa17.97■□□□□ 0.47
USP39-204ENST00000409766 TSEN15Q8WW01 171 aaKnown RBP17.97■□□□□ 0.47
USP39-204ENST00000409766 CREB3L1Q96BA8 519 aa17.97■□□□□ 0.47
USP39-204ENST00000409766 SH2D2AQ9NP31 389 aa17.97■□□□□ 0.47
USP39-204ENST00000409766 AKAP7Q9P0M2 348 aaPredicted RBP17.97■□□□□ 0.47
USP39-204ENST00000409766 ANXA2P2A6NMY6 339 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 ZNF814B7Z6K7 855 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 ANXA2P07355 339 aaKnown RBP17.96■□□□□ 0.47
USP39-204ENST00000409766 ZNF239Q16600 458 aaKnown RBP17.96■□□□□ 0.47
USP39-204ENST00000409766 TMPRSS12Q86WS5 348 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 RPS19BP1Q86WX3 136 aaKnown RBP17.96■□□□□ 0.47
USP39-204ENST00000409766 LINC00346Q8IVM7 164 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 GLB1L2Q8IW92 636 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 ARMC10Q8N2F6 343 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 TOMM5Q8N4H5 51 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 PAQR8Q8TEZ7 354 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 SMIM4Q8WVI0 70 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 RBP7Q96R05 134 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 PISDQ9UG56 409 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 NUFIP1Q9UHK0 495 aaKnown RBP17.96■□□□□ 0.47
USP39-204ENST00000409766 PAIP2BQ9ULR5 123 aaKnown RBP17.96■□□□□ 0.47
USP39-204ENST00000409766 GTF2A1LQ9UNN4 478 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 HDGFL3Q9Y3E1 203 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 ALG5Q9Y673 324 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 MED12Q93074 2177 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 A0A087WZY1 265 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 TRAF3IP2O43734 574 aaPredicted RBP17.96■□□□□ 0.47
USP39-204ENST00000409766 ORC5O43913 435 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 SFTPDP35247 375 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 MLF1P58340 268 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 TMEM176BQ3YBM2 270 aaPredicted RBP17.96■□□□□ 0.47
USP39-204ENST00000409766 RNASE12Q5GAN4 147 aaKnown RBP17.96■□□□□ 0.47
USP39-204ENST00000409766 GTPBP8Q8N3Z3 284 aaPredicted RBP17.96■□□□□ 0.47
USP39-204ENST00000409766 FBXL3Q9UKT7 428 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 PADI1Q9ULC6 663 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 LOXL2Q9Y4K0 774 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 ETV7Q9Y603 341 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 R4GMQ9 66 aa17.96■□□□□ 0.47
USP39-204ENST00000409766 LNP1A1A4G5 178 aa17.95■□□□□ 0.46
USP39-204ENST00000409766 MASP2O00187 686 aa17.95■□□□□ 0.46
USP39-204ENST00000409766 RAD1O60671 282 aa17.95■□□□□ 0.46
USP39-204ENST00000409766 IGHEP01854 428 aa17.95■□□□□ 0.46
USP39-204ENST00000409766 RAB40ALP0C0E4 278 aa17.95■□□□□ 0.46
USP39-204ENST00000409766 CSRP1P21291 193 aaKnown RBP17.95■□□□□ 0.46
USP39-204ENST00000409766 CFPP27918 469 aa17.95■□□□□ 0.46
USP39-204ENST00000409766 THEM4Q5T1C6 240 aa17.95■□□□□ 0.46
USP39-204ENST00000409766 DEGS2Q6QHC5 323 aa17.95■□□□□ 0.46
USP39-204ENST00000409766 SYNPRQ8TBG9 265 aa17.95■□□□□ 0.46
USP39-204ENST00000409766 RAB40AQ8WXH6 277 aa17.95■□□□□ 0.46
USP39-204ENST00000409766 MIB2Q96AX9 1013 aa17.95■□□□□ 0.46
USP39-204ENST00000409766 NEK6Q9HC98 313 aa17.95■□□□□ 0.46
USP39-204ENST00000409766 A8MV72 311 aaPredicted RBP17.94■□□□□ 0.46
USP39-204ENST00000409766 INMT-MINDY4F8WBC2 141 aa17.94■□□□□ 0.46
USP39-204ENST00000409766 H0YC42 278 aa17.94■□□□□ 0.46
USP39-204ENST00000409766 CD63P08962 238 aa17.94■□□□□ 0.46
USP39-204ENST00000409766 PGA4P0DJD7 388 aa17.94■□□□□ 0.46
USP39-204ENST00000409766 PGA3P0DJD8 388 aa17.94■□□□□ 0.46
USP39-204ENST00000409766 TMEM225Q6GV28 225 aa17.94■□□□□ 0.46
USP39-204ENST00000409766 ASPHD2Q6ICH7 369 aa17.94■□□□□ 0.46
USP39-204ENST00000409766 GPAT4Q86UL3 456 aa17.94■□□□□ 0.46
USP39-204ENST00000409766 SIAH3Q8IW03 269 aa17.94■□□□□ 0.46
USP39-204ENST00000409766 SERPINA12Q8IW75 414 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms