RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 MNAT1P51948 309 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 KLF3P57682 345 aaPredicted RBP12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 MYBPC1Q00872 1141 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 TEKQ02763 1124 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 KRT72Q14CN4 511 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 SGCAQ16586 387 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 GPR139Q6DWJ6 353 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 FOXL2NBQ6ZUU3 175 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 ZCCHC24Q8N2G6 241 aaKnown RBP12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 LRRC18Q8N456 261 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 SPATA3Q8NHX4 192 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 BPESC1Q9GZL8 116 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 RHCGQ9UBD6 479 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 UGT2A1Q9Y4X1 527 aa12.48□□□□□ -0.41
NIF3L1-205ENST00000409588 A0A1W2PPW3 197 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 C12orf71A8MTZ7 269 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 KIAA1324LA8MWY0 1029 aaPredicted RBP12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 H3BSA7 217 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 J3KTA2 159 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 ICMTO60725 284 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 IGHV3-13P01766 116 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 LCKP06239 509 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 H1F0P07305 194 aaKnown RBP12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 IGFBP1P08833 259 aaPredicted RBP12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 HSD17B1P14061 328 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 HNF1AP20823 631 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 PCMT1P22061 227 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 RPL4P36578 427 aaKnown RBP12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 SEC24CP53992 1094 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 FHL1Q13642 323 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 NKPD1Q17RQ9 610 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 ZNF718Q3SXZ3 478 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 PABPC1L2AQ5JQF8 200 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 TMEM154Q6P9G4 183 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 CPEB3Q8NE35 698 aaKnown RBP12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 SLC7A13Q8TCU3 470 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 SNX33Q8WV41 574 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 NABP1Q96AH0 204 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 MSI2Q96DH6 328 aaKnown RBP12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 C1orf159Q96HA4 380 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 SYT3Q9BQG1 590 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 ZNF416Q9BWM5 594 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 CYSLTR2Q9NS75 346 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 ADA2Q9NZK5 511 aa12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 CGGBP1Q9UFW8 167 aaPredicted RBP12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 SONP18583 2426 aaKnown RBP12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 YLPM1P49750 1951 aaKnown RBP12.47□□□□□ -0.41
NIF3L1-205ENST00000409588 TRAV27A0A087WT01 109 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 IGHV4-61A0A0C4DH41 118 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 C17orf100A8MU93 164 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 GPR37O15354 613 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 WIPF1O43516 503 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 PIP5K1CO60331 668 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 LILRA1O75019 489 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 PTP4A3O75365 173 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 NDUFB2O95178 105 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 SLC2A10O95528 541 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 TGFAP01135 160 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 COX5BP10606 129 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 ZNF32P17041 273 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 DRD4P21917 467 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 GCH1P30793 250 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 GDI2P50395 445 aaKnown RBP12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 SAMD4BQ5PRF9 694 aaKnown RBP12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 NSMAFQ92636 917 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 POP5Q969H6 163 aaKnown RBP12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 POM121L2Q96KW2 1035 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 C7orf34Q96L11 122 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 LRRC37BQ96QE4 947 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 TSPAN32Q96QS1 320 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 ELOVL3Q9HB03 270 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 HINT3Q9NQE9 182 aaKnown RBP12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 NDUFAF4Q9P032 175 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 TAAR3PQ9P1P4 343 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 MAGEL2Q9UJ55 1249 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 NDRG4Q9ULP0 352 aaKnown RBP12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 ARL2BPQ9Y2Y0 163 aa12.46□□□□□ -0.41
NIF3L1-205ENST00000409588 DCTN3O75935 186 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 FAM157BP0CG42 384 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 SNRPBP14678 240 aaKnown RBP12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 MSR1P21757 451 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 APEX1P27695 318 aaKnown RBP12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 LAP3P28838 519 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 CDAP32320 146 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 ALDH3B1P43353 468 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 ARHGDIAP52565 204 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 PSG4Q00888 419 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 TOP3AQ13472 1001 aaPredicted RBP12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 MSMPQ1L6U9 139 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 ELFN2Q5R3F8 820 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 LCE2CQ5TA81 110 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 TBPL2Q6SJ96 375 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 DPY19L2P2Q6ZN68 376 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 ZER1Q7Z7L7 766 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 ADCK1Q86TW2 530 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 LRP11Q86VZ4 500 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 PGAM4Q8N0Y7 254 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 LINC01356Q8N9X3 169 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 OR1J1Q8NGS3 322 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 IPCEF1Q8WWN9 437 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms