RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 CHRFAM7AQ494W8 412 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 FGD3Q5JSP0 725 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 PGAM4Q8N0Y7 254 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 FAM46AQ96IP4 442 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 POM121L2Q96KW2 1035 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 DHRS1Q96LJ7 313 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 LRRC37BQ96QE4 947 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 CD300AQ9UGN4 299 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 GPR160Q9UJ42 338 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 MAGEL2Q9UJ55 1249 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 CDC42EP3Q9UKI2 254 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 ADAM18Q9Y3Q7 739 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 IGLV3-9A0A075B6K5 115 aa16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 TACSTD2P09758 323 aa16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 ITGA2P17301 1181 aa16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 TCN1P20061 433 aaPredicted RBP16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 OMPP47874 163 aa16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 KLF3P57682 345 aaPredicted RBP16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 PCBD1P61457 104 aa16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 RIN1Q13671 783 aa16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 KRT72Q14CN4 511 aa16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 SAMD4BQ5PRF9 694 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 FAM122BQ7Z309 247 aa16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 ALDH16A1Q8IZ83 802 aa16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 SYNPRQ8TBG9 265 aa16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 MSI2Q96DH6 328 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 PYURFQ96I23 114 aa16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 Q96M85 177 aa16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 OR51B6Q9H340 312 aa16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 ARL8BQ9NVJ2 186 aa16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 SIGLEC7Q9Y286 467 aa16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 TIMM10BQ9Y5J6 103 aa16.81■□□□□ 0.28
TSPAN4-209ENST00000409543 ATRQ13535 2644 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 TRBV4-1A0A0J9YWV2 114 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 A0A1W2PPL8 197 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 LYNX1G3V0Z9 82 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 XKRYO14609 159 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 DCTN3O75935 186 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 NDUFB2O95178 105 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 CLPTM1O96005 669 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 HPXP02790 462 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 SEMG1P04279 462 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 LYNX1P0DP58 116 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 CCNOP22674 350 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 CHN2P52757 468 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 ERVS71-1P61550 626 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 NKPD1Q17RQ9 610 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 ELFN2Q5R3F8 820 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 AKR7LQ8NHP1 331 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 CDRT15Q96T59 188 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 FUZQ9BT04 418 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 OR2H1Q9GZK4 316 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 KRCC1Q9NPI7 259 aaPredicted RBP16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 SLCO1C1Q9NYB5 712 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 TAAR3PQ9P1P4 343 aa16.8■□□□□ 0.28
TSPAN4-209ENST00000409543 LOC100509620A0A075B734 347 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 LOC100289279A0A1B0GTE1 492 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 C12orf71A8MTZ7 269 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 H7C1C5 153 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 LMX1BO60663 402 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 LILRA1O75019 489 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 DIRAS1O95057 198 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 NAT2P11245 290 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 MSR1P21757 451 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 GDI2P50395 445 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 SMIM11AP58511 58 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 LCN6P62502 163 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 MRPS11P82912 194 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 ENDOGQ14249 297 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 SEC23BQ15437 767 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 MOGQ16653 247 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 SPATS1Q496A3 300 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 MESTQ5EB52 335 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 FAM166AQ6J272 317 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 UNQ6126/PRO20091Q6UXV3 157 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 SYT9Q86SS6 491 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 OR1J1Q8NGS3 322 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 RDH5Q92781 318 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 HPS1Q92902 700 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 ZNF570Q96NI8 536 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 GPX7Q96SL4 187 aaPredicted RBP16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 WACQ9BTA9 647 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 WNT5BQ9H1J7 359 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 CHODLQ9H9P2 273 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 NRIP3Q9NQ35 241 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 HINT3Q9NQE9 182 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 POLE4Q9NR33 117 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 NDE1Q9NXR1 346 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 EIF3KQ9UBQ5 218 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 LPAR3Q9UBY5 353 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 AURKCQ9UQB9 309 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 MALRD1Q5VYJ5 2156 aa16.79■□□□□ 0.28
TSPAN4-209ENST00000409543 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.78■□□□□ 0.283e-9■■■□□ 17.3
TSPAN4-209ENST00000409543 PRSS37A4D1T9 235 aa16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 C5orf49A4QMS7 147 aa16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 LRP5LA4QPB2 252 aa16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 C17orf100A8MU93 164 aa16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 IFNA2P01563 188 aa16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 FAM157CP0CG43 387 aa16.78■□□□□ 0.28
TSPAN4-209ENST00000409543 SDHAP31040 664 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms