RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 CA10Q9NS85 328 aa16.55■□□□□ 0.24
PPM1B-207ENST00000409486 IQCMA0A1B0GVH7 501 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 RRP9O43818 475 aaKnown RBP16.54■□□□□ 0.24
PPM1B-207ENST00000409486 KHDRBS3O75525 346 aaKnown RBP16.54■□□□□ 0.24
PPM1B-207ENST00000409486 FAM157BP0CG42 384 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 MSR1P21757 451 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 THBS4P35443 961 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 ZNF133P52736 654 aaPredicted RBP16.54■□□□□ 0.24
PPM1B-207ENST00000409486 HGFACQ04756 655 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 MEP1BQ16820 701 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 RASSF6Q6ZTQ3 369 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 ASRGL1Q7L266 308 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 ZNF584Q8IVC4 421 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 ATG16L2Q8NAA4 619 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 WFDC11Q8NEX6 87 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 UTP4Q969X6 686 aaKnown RBP16.54■□□□□ 0.24
PPM1B-207ENST00000409486 TRAF4Q9BUZ4 470 aaPredicted RBP16.54■□□□□ 0.24
PPM1B-207ENST00000409486 ZNF416Q9BWM5 594 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 CACNG6Q9BXT2 260 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 POLE4Q9NR33 117 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 DNAJB9Q9UBS3 223 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 GPRIN2O60269 458 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 NDUFS7O75251 213 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 CD8AP01732 235 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 HLA-DQA2P01906 255 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 GSTM3P21266 225 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 SLC36A3Q495N2 470 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 AMIGO2Q86SJ2 522 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 PAQR4Q8N4S7 273 aaPredicted RBP16.54■□□□□ 0.24
PPM1B-207ENST00000409486 OR4Q3Q8NH05 313 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 TEX47Q8TBZ9 253 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 ZNF556Q9HAH1 456 aa16.54■□□□□ 0.24
PPM1B-207ENST00000409486 VSX1Q9NZR4 365 aaPredicted RBP16.54■□□□□ 0.24
PPM1B-207ENST00000409486 GDF2Q9UK05 429 aaPredicted RBP16.54■□□□□ 0.24
PPM1B-207ENST00000409486 AKAP9Q99996 3911 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 DCTN6O00399 190 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 TXNDC12O95881 172 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 SERPINA5P05154 406 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 OR4A8P0C604 315 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 PAX7P23759 505 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 APOBEC3AP31941 199 aaPredicted RBP16.53■□□□□ 0.24
PPM1B-207ENST00000409486 PYCR1P32322 319 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 APLNRP35414 380 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 ARHGDIAP52565 204 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 KPNB1Q14974 876 aaKnown RBP16.53■□□□□ 0.24
PPM1B-207ENST00000409486 TBC1D28Q2M2D7 210 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 C3orf36Q3SXR2 165 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 C1QTNF12Q5T7M4 302 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 RPL13AP3Q6NVV1 102 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 ZNF774Q6NX45 483 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 YTHDF3Q7Z739 585 aaKnown RBP16.53■□□□□ 0.24
PPM1B-207ENST00000409486 FAM169BQ8N8A8 192 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 OR9Q1Q8NGQ5 310 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 PYDC1Q8WXC3 89 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 ZNF75AQ96N20 296 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 DGCR6LQ9BY27 220 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 SEMA6AQ9H2E6 1030 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 CBLN4Q9NTU7 201 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 AP4S1Q9Y587 144 aa16.53■□□□□ 0.24
PPM1B-207ENST00000409486 USF3Q68DE3 2245 aa16.52■□□□□ 0.24
PPM1B-207ENST00000409486 OR6C68A6NDL8 312 aa16.52■□□□□ 0.23
PPM1B-207ENST00000409486 DEAF1O75398 565 aaPredicted RBP16.52■□□□□ 0.23
PPM1B-207ENST00000409486 MMP7P09237 267 aaPredicted RBP16.52■□□□□ 0.23
PPM1B-207ENST00000409486 PSG4Q00888 419 aa16.52■□□□□ 0.23
PPM1B-207ENST00000409486 ENDOGQ14249 297 aaKnown RBP16.52■□□□□ 0.23
PPM1B-207ENST00000409486 TESK1Q15569 626 aa16.52■□□□□ 0.23
PPM1B-207ENST00000409486 DNM1P34Q6PK57 102 aa16.52■□□□□ 0.23
PPM1B-207ENST00000409486 GLB1L2Q8IW92 636 aa16.52■□□□□ 0.23
PPM1B-207ENST00000409486 SVOPLQ8N434 492 aa16.52■□□□□ 0.23
PPM1B-207ENST00000409486 PAPD5Q8NDF8 572 aaKnown RBP16.52■□□□□ 0.23
PPM1B-207ENST00000409486 CPEB3Q8NE35 698 aaKnown RBP16.52■□□□□ 0.23
PPM1B-207ENST00000409486 OR4F15Q8NGB8 312 aa16.52■□□□□ 0.23
PPM1B-207ENST00000409486 OR51L1Q8NGJ5 315 aa16.52■□□□□ 0.23
PPM1B-207ENST00000409486 LRTOMTQ8WZ04 291 aa16.52■□□□□ 0.23
PPM1B-207ENST00000409486 C11orf40Q8WZ69 217 aa16.52■□□□□ 0.23
PPM1B-207ENST00000409486 OTOGQ6ZRI0 2925 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 C5orf49A4QMS7 147 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 C12orf71A8MTZ7 269 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 BHLHE40O14503 412 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 MGRN1O60291 552 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 CST2P09228 141 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 APEHP13798 732 aaKnown RBP16.51■□□□□ 0.23
PPM1B-207ENST00000409486 SERPINF1P36955 418 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 ADAM8P78325 824 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 ADIPOQQ15848 244 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 FAM27BQ5VT28 67 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 ZNF544Q6NX49 715 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 OR6V1Q8N148 313 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 PROKR2Q8NFJ6 384 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 OR2T33Q8NG76 320 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 TRMT61AQ96FX7 289 aaKnown RBP16.51■□□□□ 0.23
PPM1B-207ENST00000409486 Q96MF0 132 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 VRK1Q99986 396 aaPredicted RBP16.51■□□□□ 0.23
PPM1B-207ENST00000409486 SYT3Q9BQG1 590 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 OR2H1Q9GZK4 316 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 WNT5BQ9H1J7 359 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 FBXL3Q9UKT7 428 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 B9D1Q9UPM9 204 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 SPEF1Q9Y4P9 236 aa16.51■□□□□ 0.23
PPM1B-207ENST00000409486 ARPC3O15145 178 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms