RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 RAB6CQ9H0N0 254 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 DNAJC27Q9NZQ0 273 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 MRPL15Q9P015 296 aaKnown RBP6.67□□□□□ -1.34
SCN9A-202ENST00000409435 MICAL3Q7RTP6 2002 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 TNFSF11O14788 317 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 CLDN14O95500 239 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 LAP3P28838 519 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 CD68P34810 354 aaPredicted RBP6.67□□□□□ -1.34
SCN9A-202ENST00000409435 SOX3P41225 446 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 CAMK2BQ13554 666 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 GRB7Q14451 532 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 IQCJQ1A5X6 159 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 FAM182AQ5T1J6 154 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 LRFN4Q6PJG9 635 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 SGPP2Q8IWX5 399 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 MBD3L1Q8WWY6 194 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 MUS81Q96NY9 551 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 GATA5Q9BWX5 397 aaPredicted RBP6.67□□□□□ -1.34
SCN9A-202ENST00000409435 C1orf198Q9H425 327 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 PARD6AQ9NPB6 346 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 TMEM14AQ9Y6G1 99 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 SMCHD1A6NHR9 2005 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 FGF4P08620 206 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 GNLYP22749 145 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 SSTR4P31391 388 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 MLF1P58340 268 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 KLF1Q13351 362 aaPredicted RBP6.67□□□□□ -1.34
SCN9A-202ENST00000409435 COL19A1Q14993 1142 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 ATP6AP1Q15904 470 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 SLC25A35Q3KQZ1 300 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 H3F3CQ6NXT2 135 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 ZNF740Q8NDX6 193 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 ARHGDIGQ99819 225 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 PDCD1LG2Q9BQ51 273 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 DHDHQ9UQ10 334 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 A0A1B0GV72 72 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 TCRBV7S3A2A0A539 114 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 PYCARD-AS1I3L0S3 204 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 GPR137BO60478 399 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 MRPS14O60783 128 aaKnown RBP6.67□□□□□ -1.34
SCN9A-202ENST00000409435 OR2C1O95371 312 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 ACTL6AO96019 429 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 SP1P08047 785 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 APOBEC1P41238 236 aaKnown RBP6.67□□□□□ -1.34
SCN9A-202ENST00000409435 SELENBP1Q13228 472 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 ZNF678Q5SXM1 525 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 HEPHL1Q6MZM0 1159 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 IL34Q6ZMJ4 242 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 SHFQ7M4L6 423 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 BHLHA15Q7RTS1 189 aaPredicted RBP6.67□□□□□ -1.34
SCN9A-202ENST00000409435 KLBQ86Z14 1044 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 NUP37Q8NFH4 326 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 OR52N2Q8NGI0 321 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 SCARB1Q8WTV0 552 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 BET1LQ9NYM9 111 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 FETUBQ9UGM5 382 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 LAMB2P55268 1798 aa6.67□□□□□ -1.34
SCN9A-202ENST00000409435 GOLGA4Q13439 2230 aaKnown RBP6.67□□□□□ -1.34
SCN9A-202ENST00000409435 TMED7-TICAM2A0A0A6YYA0 188 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 ARPC1BO15143 372 aaKnown RBP6.66□□□□□ -1.34
SCN9A-202ENST00000409435 VAMP5O95183 116 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 CA5AP35218 305 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 METAP1P53582 386 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 GPX6P59796 221 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 RAB1AP62820 205 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 CEACAM7Q14002 265 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 PLCXD3Q63HM9 321 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 C17orf107Q6ZR85 190 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 PGBD5Q8N414 524 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 D2HGDHQ8N465 521 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 ABHD4Q8TB40 342 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 RBMXL1Q96E39 390 aaKnown RBP6.66□□□□□ -1.34
SCN9A-202ENST00000409435 AMDHD2Q9Y303 409 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 TMED7Q9Y3B3 224 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 AQP7O14520 342 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 GATCO43716 136 aaKnown RBP6.66□□□□□ -1.34
SCN9A-202ENST00000409435 HOXB3P14651 431 aaPredicted RBP6.66□□□□□ -1.34
SCN9A-202ENST00000409435 SPI1P17947 270 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 CCKARP32238 428 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 RTP5Q14D33 572 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 ZNF239Q16600 458 aaKnown RBP6.66□□□□□ -1.34
SCN9A-202ENST00000409435 SLC18B1Q6NT16 456 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 FAHD2BQ6P2I3 314 aaPredicted RBP6.66□□□□□ -1.34
SCN9A-202ENST00000409435 GDPGP1Q6ZNW5 385 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 ZNF695Q8IW36 515 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 HS3ST5Q8IZT8 346 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 CLRN3Q8NCR9 226 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 OR2T4Q8NH00 348 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 OR2T11Q8NH01 316 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 FAHD2AQ96GK7 314 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 NMNAT1Q9HAN9 279 aaPredicted RBP6.66□□□□□ -1.34
SCN9A-202ENST00000409435 RANGRFQ9HD47 186 aaPredicted RBP6.66□□□□□ -1.34
SCN9A-202ENST00000409435 ONECUT1Q9UBC0 465 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 A0A1W2PQL4 384 aaPredicted RBP6.66□□□□□ -1.34
SCN9A-202ENST00000409435 H3BMQ9 156 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 FAM189A1O60320 539 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 S100A7P31151 101 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 NPBWR1P48145 328 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 CLINT1Q14677 625 aa6.66□□□□□ -1.34
SCN9A-202ENST00000409435 SPHARQ15513 63 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms