RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 CDH11P55287 796 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 TFF3Q07654 80 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 GABRA6Q16445 453 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 TBRG1Q3YBR2 411 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 NXNL2Q5VZ03 156 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 DNM1P34Q6PK57 102 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 ERI1Q8IV48 349 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 GLB1L2Q8IW92 636 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 SKA3Q8IX90 412 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 SLC22A24Q8N4F4 322 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 FAM26EQ8N5C1 309 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 FNDC8Q8TC99 324 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 FBLIM1Q8WUP2 373 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 TTTY10Q9BZA0 68 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 ACTR6Q9GZN1 396 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 RACGAP1Q9H0H5 632 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 ZNF696Q9H7X3 374 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 NPDC1Q9NQX5 325 aaPredicted RBP12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 POLE4Q9NR33 117 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 USP9XQ93008 2570 aaPredicted RBP12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 GLCEO94923 617 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 CNOT4O95628 575 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 SNRPGP62308 76 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 TEKQ02763 1124 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 GLO1Q04760 184 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 IL18R1Q13478 541 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 P2RY6Q15077 328 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 LAIR2Q6ISS4 152 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 MEPCEQ7L2J0 689 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 THAP5Q7Z6K1 395 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 SETD9Q8NE22 299 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 SLC26A10Q8NG04 563 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 OR6N2Q8NGY6 317 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 LINC01560Q8TB33 94 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 SSC4DQ8WTU2 575 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 BCL2L2Q92843 193 aaPredicted RBP12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 TEAD3Q99594 435 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 ZNF416Q9BWM5 594 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 NOX3Q9HBY0 568 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 BATF3Q9NR55 127 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 CLN6Q9NWW5 311 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 ZNF224Q9NZL3 707 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 POLR1DQ9Y2S0 133 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 COMMD3-BMI1R4GMX3 469 aa12.35□□□□□ -0.43
CHRNA1-204ENST00000409323 UBR5O95071 2799 aaPredicted RBP12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 C16orf97H3BN30 126 aa12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 XPNPEP2O43895 674 aa12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 SPARCP09486 303 aa12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 CD79AP11912 226 aa12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 MSR1P21757 451 aa12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 ADAM8P78325 824 aa12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 TGFBR3Q03167 851 aa12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 HSF2Q03933 536 aa12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 CDK5R2Q13319 367 aa12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 ENDOGQ14249 297 aaKnown RBP12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 ANKRD16Q6P6B7 361 aa12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 TMEM154Q6P9G4 183 aa12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 OR51G2Q8NGK0 314 aa12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 TRUB1Q8WWH5 349 aaKnown RBP12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 RNASE6Q93091 150 aaKnown RBP12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 FBXO17Q96EF6 278 aa12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 TBX5Q99593 518 aa12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 YTHDF1Q9BYJ9 559 aaKnown RBP12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 ELOVL5Q9NYP7 299 aa12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 HSPE1-MOB4S4R3N1 261 aa12.34□□□□□ -0.43
CHRNA1-204ENST00000409323 RTTNQ86VV8 2226 aa12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 PRODHO43272 600 aa12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 WNT11O96014 354 aa12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 OR8G3PP0DMU2 310 aa12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 PSMB1P20618 241 aaKnown RBP12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 GUCA1AP43080 201 aaPredicted RBP12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 MRPS34P82930 218 aaKnown RBP12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 OCLNQ16625 522 aa12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 FOXL2NBQ6ZUU3 175 aa12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 SPATC1Q76KD6 591 aa12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 SLC16A14Q7RTX9 510 aa12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 GID4Q8IVV7 300 aa12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 RFLNBQ8N5W9 214 aa12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 WDR31Q8NA23 367 aa12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 BPIFB6Q8NFQ5 453 aa12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 OR10H5Q8NGA6 315 aa12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 OR4F15Q8NGB8 312 aa12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 WFIKKN1Q96NZ8 548 aa12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 ASH2LQ9UBL3 628 aa12.33□□□□□ -0.44
CHRNA1-204ENST00000409323 WIPF3A6NGB9 483 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 ZNF593O00488 134 aaPredicted RBP12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 MPZL2O60487 215 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 TNFAIP8O95379 198 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 ZNF823P16415 610 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 AGAP20933 346 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 HTR1FP30939 366 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 UBE2NP61088 152 aaKnown RBP12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 ZNF91Q05481 1191 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 TAB1Q15750 504 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 KRT80Q6KB66 452 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 DPY19L4Q7Z388 723 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 AKR7LQ8NHP1 331 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 SGCDQ92629 289 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 RNFT2Q96EX2 444 aa12.32□□□□□ -0.44
CHRNA1-204ENST00000409323 RNF121Q9H920 327 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms