RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 DLX5P56178 289 aa7.55□□□□□ -1.2
SNX13-201ENST00000409076 FXYD4P59646 89 aa7.55□□□□□ -1.2
SNX13-201ENST00000409076 TRA2BP62995 288 aaKnown RBP7.55□□□□□ -1.2
SNX13-201ENST00000409076 MFGE8Q08431 387 aaPredicted RBP7.55□□□□□ -1.2
SNX13-201ENST00000409076 TGIF1Q15583 401 aa7.55□□□□□ -1.2
SNX13-201ENST00000409076 PRICKLE4Q2TBC4 344 aa7.55□□□□□ -1.2
SNX13-201ENST00000409076 PRAMEF20Q5VT98 475 aa7.55□□□□□ -1.2
SNX13-201ENST00000409076 TIGD3Q6B0B8 471 aa7.55□□□□□ -1.2
SNX13-201ENST00000409076 FAM199XQ6PEV8 388 aaPredicted RBP7.55□□□□□ -1.2
SNX13-201ENST00000409076 TMPPEQ6ZT21 453 aa7.55□□□□□ -1.2
SNX13-201ENST00000409076 ZNF550Q7Z398 422 aa7.55□□□□□ -1.2
SNX13-201ENST00000409076 TRAPPC6BQ86SZ2 158 aa7.55□□□□□ -1.2
SNX13-201ENST00000409076 IL17RCQ8NAC3 791 aa7.55□□□□□ -1.2
SNX13-201ENST00000409076 OR2G2Q8NGZ5 317 aa7.55□□□□□ -1.2
SNX13-201ENST00000409076 BMFQ96LC9 184 aa7.55□□□□□ -1.2
SNX13-201ENST00000409076 NKX2-4Q9H2Z4 354 aa7.55□□□□□ -1.2
SNX13-201ENST00000409076 PLEKHA1Q9HB21 404 aa7.55□□□□□ -1.2
SNX13-201ENST00000409076 ZNF337Q9Y3M9 751 aa7.55□□□□□ -1.2
SNX13-201ENST00000409076 RHBDD3Q9Y3P4 386 aa7.55□□□□□ -1.2
SNX13-201ENST00000409076 TMEM200CA6NKL6 621 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 TGFBR3LH3BV60 316 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 GLAP06280 429 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 MMP15P51511 669 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 EBPQ15125 230 aaKnown RBP7.54□□□□□ -1.2
SNX13-201ENST00000409076 AWAT2Q6E213 333 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 MISPQ8IVT2 679 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 DND1Q8IYX4 353 aaKnown RBP7.54□□□□□ -1.2
SNX13-201ENST00000409076 ZNF485Q8NCK3 441 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 NPEPL1Q8NDH3 523 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 ZNF248Q8NDW4 579 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 THAP6Q8TBB0 222 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 TAAR8Q969N4 342 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 DMRTA2Q96SC8 542 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 GFI1Q99684 422 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 ANKRD10Q9NXR5 420 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 ZNF223Q9UK11 482 aaPredicted RBP7.54□□□□□ -1.2
SNX13-201ENST00000409076 TMEM269A0A1B0GVZ9 245 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 A0A1W2PNR3 127 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 MCRIP1C9JLW8 97 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 F5H5K5 113 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 GABARAPH6UMI1 98 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 MASP2O00187 686 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 GALR3O60755 368 aaPredicted RBP7.54□□□□□ -1.2
SNX13-201ENST00000409076 SERPINA5P05154 406 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 H2BFMP0C1H6 154 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 ICAM2P13598 275 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 S1PR1P21453 382 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 TPMTP51580 245 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 NFATC4Q14934 902 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 SGCAQ16586 387 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 TMEM240Q5SV17 173 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 TMEM92Q6UXU6 159 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 CD300LDQ6UXZ3 194 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 LANCL3Q6ZV70 420 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 DCXRQ7Z4W1 244 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 SLC35F3Q8IY50 421 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 ELP5Q8TE02 316 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 ZBTB8AQ96BR9 441 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 C8orf44Q96CB5 159 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 GPR137Q96N19 417 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 SORCS2Q96PQ0 1159 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 GDF15Q99988 308 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 TIMM29Q9BSF4 260 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 CHRDQ9H2X0 955 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 MED17Q9NVC6 651 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 MSRAQ9UJ68 235 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 LSM5Q9Y4Y9 91 aaKnown RBP7.54□□□□□ -1.2
SNX13-201ENST00000409076 ENTPD2Q9Y5L3 495 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 NPIPA5E9PKD4 350 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 M0R036 132 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 ADAP1O75689 374 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 UTS2O95399 124 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 FGF19O95750 216 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 SEMA4FO95754 770 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 PNPP00491 289 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 AKAIN1P0CW23 69 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 HNRNPA2B1P22626 353 aaKnown RBP7.54□□□□□ -1.2
SNX13-201ENST00000409076 INPP5JQ15735 1006 aaPredicted RBP7.54□□□□□ -1.2
SNX13-201ENST00000409076 ACKR1Q16570 336 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 KRBOX4Q5JUW0 171 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 PDSS1Q5T2R2 415 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 LRRC18Q8N456 261 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 ZNF417Q8TAU3 575 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 ZNF587Q96SQ5 575 aaPredicted RBP7.54□□□□□ -1.2
SNX13-201ENST00000409076 HDAC8Q9BY41 377 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 FOXQ1Q9C009 403 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 EVA1AQ9H8M9 152 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 KLRF1Q9NZS2 232 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 MBD2Q9UBB5 411 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 NPIPA1Q9UND3 350 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 NPFFR2Q9Y5X5 522 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 B3GALT1Q9Y5Z6 326 aa7.54□□□□□ -1.2
SNX13-201ENST00000409076 MEX3AA1L020 520 aaKnown RBP7.53□□□□□ -1.2
SNX13-201ENST00000409076 RHPN2P1A8MT19 583 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 GLCEO94923 617 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 GP1BBP13224 206 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 DAOP14920 347 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 CCNOP22674 350 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 ACAA2P42765 397 aaKnown RBP7.53□□□□□ -1.2
SNX13-201ENST00000409076 ZNF616Q08AN1 781 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms