RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 IL5P05113 134 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 CD37P11049 281 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 CALCRP30988 508 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 SELENBP1Q13228 472 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 ARHGAP11BQ3KRB8 267 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 RHOUQ7L0Q8 258 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 SLC16A11Q8NCK7 471 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 ZNF740Q8NDX6 193 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 Q96M85 177 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 ZMAT3Q9HA38 289 aaKnown RBP11.9□□□□□ -0.5
RNF43-201ENST00000407977 ACOXLQ9NUZ1 547 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 C4orf47A7E2U8 309 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 GPR171O14626 319 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 IGHEP01854 428 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 MBP02144 154 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 FCGR2CP31995 323 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 EPHA5P54756 1037 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.9□□□□□ -0.5
RNF43-201ENST00000407977 DCXRQ7Z4W1 244 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 LRRC18Q8N456 261 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 OR11L1Q8NGX0 322 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 RASD2Q96D21 266 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 NEURL2Q9BR09 285 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 C20orf24Q9BUV8 137 aa11.9□□□□□ -0.5
RNF43-201ENST00000407977 PLPP1O14494 284 aa11.9□□□□□ -0.51
RNF43-201ENST00000407977 ZP2Q05996 745 aa11.9□□□□□ -0.51
RNF43-201ENST00000407977 EGR3Q06889 387 aa11.9□□□□□ -0.51
RNF43-201ENST00000407977 C2orf76Q3KRA6 126 aa11.9□□□□□ -0.51
RNF43-201ENST00000407977 ACSM5Q6NUN0 579 aa11.9□□□□□ -0.51
RNF43-201ENST00000407977 H1FNTQ75WM6 255 aaPredicted RBP11.9□□□□□ -0.51
RNF43-201ENST00000407977 GRINAQ7Z429 371 aa11.9□□□□□ -0.51
RNF43-201ENST00000407977 PLPP6Q8IY26 295 aa11.9□□□□□ -0.51
RNF43-201ENST00000407977 TMEM99Q8N816 258 aa11.9□□□□□ -0.51
RNF43-201ENST00000407977 KDF1Q8NAX2 398 aaPredicted RBP11.9□□□□□ -0.51
RNF43-201ENST00000407977 NSG1A0A0A6YYJ2 146 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 BCL2L11O43521 198 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 TUSC2O75896 110 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 RPL12P30050 165 aaKnown RBP11.89□□□□□ -0.51
RNF43-201ENST00000407977 SOWAHCQ53LP3 525 aaPredicted RBP11.89□□□□□ -0.51
RNF43-201ENST00000407977 C1orf140Q5VVS0 124 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 TMEM182Q6ZP80 229 aaPredicted RBP11.89□□□□□ -0.51
RNF43-201ENST00000407977 GALNT16Q8N428 558 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 OR1J1Q8NGS3 322 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 SMIM4Q8WVI0 70 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 ST8SIA2Q92186 375 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 ZNF251Q9BRH9 671 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 SLC25A37Q9NYZ2 338 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 FITM1A5D6W6 292 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 OR8U8P0C7N1 319 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 SPP1P10451 314 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 AQP6Q13520 282 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 PHLDA2Q53GA4 152 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 IL34Q6ZMJ4 242 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 NKAIN4Q8IVV8 208 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 CORO2AQ92828 525 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 HDAC8Q9BY41 377 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 TRAV1-2A0A0B4J238 106 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 DCTN6O00399 190 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 LAMTOR5O43504 91 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 TXNDC12O95881 172 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 OR4E1P0C645 316 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 MMP15P51511 669 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 FABP5Q01469 135 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 NR0B2Q15466 257 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 SIGIRRQ6IA17 410 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 RPUSD3Q6P087 351 aaKnown RBP11.89□□□□□ -0.51
RNF43-201ENST00000407977 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.89□□□□□ -0.517e-12■■■■□ 23.4
RNF43-201ENST00000407977 JAM3Q9BX67 310 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 GAR1Q9NY12 217 aaKnown RBP11.89□□□□□ -0.51
RNF43-201ENST00000407977 C19orf53Q9UNZ5 99 aaPredicted RBP11.89□□□□□ -0.51
RNF43-201ENST00000407977 CDC14CA4D256 554 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 ZNF727A8MUV8 499 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 HOXD11P31277 338 aaPredicted RBP11.89□□□□□ -0.51
RNF43-201ENST00000407977 RAG2P55895 527 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 FAM74A1Q5RGS3 127 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 SLC39A5Q6ZMH5 540 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 PPP1R3BQ86XI6 285 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 VRK3Q8IV63 474 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 LINC00346Q8IVM7 164 aa11.89□□□□□ -0.51
RNF43-201ENST00000407977 INTS12Q96CB8 462 aaKnown RBP11.89□□□□□ -0.51
RNF43-201ENST00000407977 NXT1Q9UKK6 140 aaKnown RBP11.89□□□□□ -0.51
RNF43-201ENST00000407977 ZNF814B7Z6K7 855 aa11.88□□□□□ -0.51
RNF43-201ENST00000407977 GFYI3L273 518 aa11.88□□□□□ -0.51
RNF43-201ENST00000407977 HMGN4O00479 90 aa11.88□□□□□ -0.51
RNF43-201ENST00000407977 SPINT2O43291 252 aa11.88□□□□□ -0.51
RNF43-201ENST00000407977 CTF1Q16619 201 aa11.88□□□□□ -0.51
RNF43-201ENST00000407977 OR5M10Q6IEU7 315 aa11.88□□□□□ -0.51
RNF43-201ENST00000407977 TMEM81Q6P7N7 255 aa11.88□□□□□ -0.51
RNF43-201ENST00000407977 TFAP2EQ6VUC0 442 aa11.88□□□□□ -0.51
RNF43-201ENST00000407977 KLHDC1Q8N7A1 406 aa11.88□□□□□ -0.51
RNF43-201ENST00000407977 OR8U1Q8NH10 309 aa11.88□□□□□ -0.51
RNF43-201ENST00000407977 CMTM2Q8TAZ6 248 aa11.88□□□□□ -0.51
RNF43-201ENST00000407977 LIPHQ8WWY8 451 aa11.88□□□□□ -0.51
RNF43-201ENST00000407977 C2orf50Q96LR7 162 aa11.88□□□□□ -0.51
RNF43-201ENST00000407977 CGGBP1Q9UFW8 167 aaPredicted RBP11.88□□□□□ -0.51
RNF43-201ENST00000407977 MYO18AQ92614 2054 aaKnown RBP11.88□□□□□ -0.51
RNF43-201ENST00000407977 ZBTB42B2RXF5 422 aa11.88□□□□□ -0.51
RNF43-201ENST00000407977 NME2P1O60361 137 aa11.88□□□□□ -0.51
RNF43-201ENST00000407977 AQP8O94778 261 aa11.88□□□□□ -0.51
RNF43-201ENST00000407977 CEBPBP17676 345 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms