RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 HIST2H3AQ71DI3 136 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 P4HA3Q7Z4N8 544 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 LDLRAD3Q86YD5 345 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 SULF2Q8IWU5 870 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 OR4S1Q8NGB4 309 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 NUDCD2Q8WVJ2 157 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 OR2A7Q96R45 310 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 ZFYVE21Q9BQ24 234 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 PIGQQ9BRB3 760 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 CHST6Q9GZX3 395 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 POLMQ9NP87 494 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 GAR1Q9NY12 217 aaKnown RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 DICER1Q9UPY3 1922 aaKnown RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 A0A087WZY1 265 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 BHLHE40O14503 412 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 ZNF354AO60765 605 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 SEMA7AO75326 666 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 CTAG2O75638 210 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 TXNDC12O95881 172 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 H2BFSP57053 126 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 SSBP1Q04837 148 aaKnown RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 INPP5JQ15735 1006 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 SGCAQ16586 387 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 PRSS53Q2L4Q9 553 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 SLC22A6Q4U2R8 563 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 OR52W1Q6IF63 320 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 FJX1Q86VR8 437 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 NR2C2APQ86WQ0 139 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 ETFBKMTQ8IXQ9 262 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 ZNF283Q8N7M2 679 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 TMEM229BQ8NBD8 167 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 NAXEQ8NCW5 288 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 OR9K2Q8NGE7 335 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 NUBPLQ8TB37 319 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 WNT2BQ93097 391 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 KIRREL1Q96J84 757 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 HHIPQ96QV1 700 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 NELFAQ9H3P2 528 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 C19orf53Q9UNZ5 99 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 PLEKHM1Q9Y4G2 1056 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 RGPD3A6NKT7 1758 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 RGPD4Q7Z3J3 1758 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 SLC17A2O00624 439 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 ZNF749O43361 778 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 RECKO95980 971 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 PI3P19957 117 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 NFYBP25208 207 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 PPP1R1AQ13522 171 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 METRNLQ641Q3 311 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 C5orf46Q6UWT4 87 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 TMPRSS9Q7Z410 1059 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 ZNF761Q86XN6 746 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 FAM24BQ8N5W8 94 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 OR1J1Q8NGS3 322 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 MARCH1Q8TCQ1 289 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 ARRDC3Q96B67 414 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 RSRP1Q9BUV0 290 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 OR11A1Q9GZK7 315 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 C2orf42Q9NWW7 574 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 TAS2R4Q9NYW5 299 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 SLC23A2Q9UGH3 650 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 RAB22AQ9UL26 194 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 EMC9Q9Y3B6 208 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 SRCAPQ6ZRS2 3230 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 FAM230AA0A1W2PPH8 454 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 GALR3O60755 368 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 FGF18O76093 207 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 ABLIM3O94929 683 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 IFNA2P01563 188 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 TMIGD3P0DMS9 266 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 THBS2P35442 1172 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 TAGLN2P37802 199 aaKnown RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 TSFMP43897 325 aaKnown RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 CX3CR1P49238 355 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 SEC13P55735 322 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 RAP1AP62834 184 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 HTRA4P83105 476 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 VWA2Q5GFL6 755 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 FAM109BQ6ICB4 259 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 WBP2NLQ6ICG8 309 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 MRM1Q6IN84 353 aaKnown RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 CLEC9AQ6UXN8 241 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 METTL27Q8N6F8 245 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 OR5D14Q8NGL3 314 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 ELF4Q99607 663 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-202ENST00000405010 SEC11CQ9BY50 192 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 LRFN1Q9P244 771 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 COPS7AQ9UBW8 275 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 SLC22A13Q9Y226 551 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 RHBDD3Q9Y3P4 386 aa6.74□□□□□ -1.33
HDAC9-202ENST00000405010 A0A1W2PQU0 124 aa6.73□□□□□ -1.33
HDAC9-202ENST00000405010 ADAM10O14672 748 aa6.73□□□□□ -1.33
HDAC9-202ENST00000405010 TAAR5O14804 337 aa6.73□□□□□ -1.33
HDAC9-202ENST00000405010 JTBO76095 146 aa6.73□□□□□ -1.33
HDAC9-202ENST00000405010 WNT11O96014 354 aa6.73□□□□□ -1.33
HDAC9-202ENST00000405010 CRABP1P29762 137 aa6.73□□□□□ -1.33
HDAC9-202ENST00000405010 HRH1P35367 487 aa6.73□□□□□ -1.33
HDAC9-202ENST00000405010 POLR2GP62487 172 aaKnown RBP eCLIP6.73□□□□□ -1.33
HDAC9-202ENST00000405010 NTHL1P78549 312 aa6.73□□□□□ -1.33
HDAC9-202ENST00000405010 CLINT1Q14677 625 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms