RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ETFDHQ16134 617 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 TP53I3Q53FA7 332 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 RNFT1Q5M7Z0 435 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 CARD17Q5XLA6 110 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 SLC25A47Q6Q0C1 308 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 USP43Q70EL4 1123 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 WDFY1Q8IWB7 410 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 RFLNBQ8N5W9 214 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 OR10H5Q8NGA6 315 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 CPT1CQ8TCG5 803 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 ROBO4Q8WZ75 1007 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 ZNF385AQ96PM9 386 aaKnown RBP18.64■□□□□ 0.57
TPM1-208ENST00000404484 TTYH2Q9BSA4 534 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 GLTPQ9NZD2 209 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 GNG8Q9UK08 70 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 FLVCR1Q9Y5Y0 555 aa18.64■□□□□ 0.57
TPM1-208ENST00000404484 GPR171O14626 319 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 SPARCP09486 303 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 GAAP10253 952 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 CPN1P15169 458 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 LAP3P28838 519 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 UGT2B10P36537 528 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 NCS1P62166 190 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 TUBA1BP68363 451 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 PMP22Q01453 160 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 RASGEF1BQ0VAM2 473 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 SPCS2Q15005 226 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 CCDC58Q4VC31 144 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 TUBA1AQ71U36 451 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 TMEM123Q8N131 208 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 CISD2Q8N5K1 135 aaKnown RBP18.63■□□□□ 0.57
TPM1-208ENST00000404484 TMEM54Q969K7 222 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 MCHR2Q969V1 340 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 ZNF845Q96IR2 970 aaPredicted RBP18.63■□□□□ 0.57
TPM1-208ENST00000404484 EXOSC4Q9NPD3 245 aaKnown RBP18.63■□□□□ 0.57
TPM1-208ENST00000404484 EMC3Q9P0I2 261 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 KCNG2Q9UJ96 466 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 LIPGQ9Y5X9 500 aa18.63■□□□□ 0.57
TPM1-208ENST00000404484 IGKV3D-15A0A087WSY6 115 aa18.62■□□□□ 0.57
TPM1-208ENST00000404484 METTL15A6NJ78 407 aa18.62■□□□□ 0.57
TPM1-208ENST00000404484 SLC43A1O75387 559 aa18.62■□□□□ 0.57
TPM1-208ENST00000404484 AQP8O94778 261 aa18.62■□□□□ 0.57
TPM1-208ENST00000404484 ZNF432O94892 652 aa18.62■□□□□ 0.57
TPM1-208ENST00000404484 GPANK1O95872 356 aa18.62■□□□□ 0.57
TPM1-208ENST00000404484 HLA-DPB1P04440 258 aa18.62■□□□□ 0.57
TPM1-208ENST00000404484 QDPRP09417 244 aa18.62■□□□□ 0.57
TPM1-208ENST00000404484 GALP22466 123 aa18.62■□□□□ 0.57
TPM1-208ENST00000404484 ZNF133P52736 654 aaPredicted RBP18.62■□□□□ 0.57
TPM1-208ENST00000404484 ZNF684Q5T5D7 378 aa18.62■□□□□ 0.57
TPM1-208ENST00000404484 KCTD18Q6PI47 426 aaPredicted RBP18.62■□□□□ 0.57
TPM1-208ENST00000404484 ZFP41Q8N8Y5 198 aa18.62■□□□□ 0.57
TPM1-208ENST00000404484 ZIC4Q8N9L1 334 aa18.62■□□□□ 0.57
TPM1-208ENST00000404484 THEM6Q8WUY1 208 aa18.62■□□□□ 0.57
TPM1-208ENST00000404484 NSMAFQ92636 917 aa18.62■□□□□ 0.57
TPM1-208ENST00000404484 SNRNP40Q96DI7 357 aaKnown RBP18.62■□□□□ 0.57
TPM1-208ENST00000404484 SHANK1Q9Y566 2161 aa18.61■□□□□ 0.57
TPM1-208ENST00000404484 PNMA8CA0A1B0GUJ8 204 aa18.61■□□□□ 0.57
TPM1-208ENST00000404484 PLPP2O43688 288 aa18.61■□□□□ 0.57
TPM1-208ENST00000404484 GPX5O75715 221 aa18.61■□□□□ 0.57
TPM1-208ENST00000404484 GUCA1AP43080 201 aaPredicted RBP18.61■□□□□ 0.57
TPM1-208ENST00000404484 CRYBB2P43320 205 aa18.61■□□□□ 0.57
TPM1-208ENST00000404484 TGM4P49221 684 aa18.61■□□□□ 0.57
TPM1-208ENST00000404484 INAQ16352 499 aa18.61■□□□□ 0.57
TPM1-208ENST00000404484 PCK2Q16822 640 aa18.61■□□□□ 0.57
TPM1-208ENST00000404484 C10orf128Q5T292 105 aa18.61■□□□□ 0.57
TPM1-208ENST00000404484 RNF128Q8TEB7 428 aa18.61■□□□□ 0.57
TPM1-208ENST00000404484 TMEM45BQ96B21 275 aa18.61■□□□□ 0.57
TPM1-208ENST00000404484 PELI1Q96FA3 418 aa18.61■□□□□ 0.57
TPM1-208ENST00000404484 TTTY10Q9BZA0 68 aa18.61■□□□□ 0.57
TPM1-208ENST00000404484 PRRG4Q9BZD6 226 aa18.61■□□□□ 0.57
TPM1-208ENST00000404484 DCSTAMPQ9H295 470 aa18.61■□□□□ 0.57
TPM1-208ENST00000404484 B3GAT2Q9NPZ5 323 aa18.61■□□□□ 0.57
TPM1-208ENST00000404484 KLHDC2Q9Y2U9 406 aa18.61■□□□□ 0.57
TPM1-208ENST00000404484 SF3B6Q9Y3B4 125 aaKnown RBP18.61■□□□□ 0.57
TPM1-208ENST00000404484 IGKV1D-43A0A0B4J1Z2 117 aa18.6■□□□□ 0.57
TPM1-208ENST00000404484 A0A1W2PPL8 197 aa18.6■□□□□ 0.57
TPM1-208ENST00000404484 CD1AP06126 327 aa18.6■□□□□ 0.57
TPM1-208ENST00000404484 ZNF182P17025 639 aaPredicted RBP18.6■□□□□ 0.57
TPM1-208ENST00000404484 RPS25P62851 125 aaKnown RBP18.6■□□□□ 0.57
TPM1-208ENST00000404484 SIRPAP78324 504 aa18.6■□□□□ 0.57
TPM1-208ENST00000404484 RNPS1Q15287 305 aaKnown RBP18.6■□□□□ 0.57
TPM1-208ENST00000404484 RPL22L1Q6P5R6 122 aaKnown RBP18.6■□□□□ 0.57
TPM1-208ENST00000404484 CD200R1LQ6Q8B3 271 aa18.6■□□□□ 0.57
TPM1-208ENST00000404484 AAED1Q7RTV5 226 aa18.6■□□□□ 0.57
TPM1-208ENST00000404484 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.6■□□□□ 0.57
TPM1-208ENST00000404484 C20orf196Q8IYI0 205 aa18.6■□□□□ 0.57
TPM1-208ENST00000404484 NDNFQ8TB73 568 aa18.6■□□□□ 0.57
TPM1-208ENST00000404484 FOXN4Q96NZ1 517 aa18.6■□□□□ 0.57
TPM1-208ENST00000404484 CENPOQ9BU64 300 aa18.6■□□□□ 0.57
TPM1-208ENST00000404484 RNF122Q9H9V4 155 aa18.6■□□□□ 0.57
TPM1-208ENST00000404484 IKZF2Q9UKS7 526 aa18.6■□□□□ 0.57
TPM1-208ENST00000404484 GSTK1Q9Y2Q3 226 aa18.6■□□□□ 0.57
TPM1-208ENST00000404484 SVILO95425 2214 aa18.6■□□□□ 0.57
TPM1-208ENST00000404484 A0A1B0GVC2 190 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 TRDV1A0A1B0GX56 115 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 OGG1O15527 345 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 LSAMPQ13449 338 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 DMKNQ6E0U4 476 aaPredicted RBP18.59■□□□□ 0.57
TPM1-208ENST00000404484 YIPF7Q8N8F6 280 aa18.59■□□□□ 0.57
TPM1-208ENST00000404484 C11orf40Q8WZ69 217 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms