RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	TNFRSF6B	O95407	300 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	AHSA1	O95433	338 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	CPSF4	O95639	269 aa	Known RBP	5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	RAB36	O95755	333 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	MBP	P02686	304 aa	Predicted RBP	5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	DBI	P07108	87 aa	Known RBP	5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	NHLRC4	P0CG21	123 aa	Predicted RBP	5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	NR2F1	P10589	423 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	G6PD	P11413	515 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	CD79A	P11912	226 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	NCF2	P19878	526 aa	Predicted RBP	5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	CLDN8	P56748	225 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	CLDN17	P56750	224 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	PROK1	P58294	105 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	ARF1	P84077	181 aa	Known RBP	5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	EPS8	Q12929	822 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	PCLAF	Q15004	111 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	LARS2	Q15031	903 aa	Known RBP	5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	PDCD2	Q16342	344 aa	Predicted RBP	5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	GSG1	Q2KHT4	349 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	UGT3A2	Q3SY77	523 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	MMEL1	Q495T6	779 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	LIN52	Q52LA3	116 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	C1orf140	Q5VVS0	124 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	AP1AR	Q63HQ0	302 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	WBP2NL	Q6ICG8	309 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	OR4F3	Q6IEY1	312 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	ACSM5	Q6NUN0	579 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	TMEM65	Q6PI78	240 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	DCDC5	Q6ZRR9	648 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	ZCCHC23	Q6ZST2	131 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	CREB3L2	Q70SY1	520 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	OLIG3	Q7RTU3	272 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	HMGN2P46	Q86SG4	172 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	RIMKLA	Q8IXN7	391 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	PEX5L	Q8IYB4	626 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	CLECL1	Q8IZS7	167 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	OR8H2	Q8N162	312 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	CLEC4F	Q8N1N0	589 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	CADM2	Q8N3J6	435 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	CNOT9	Q92600	299 aa	Known RBP	5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	NEURL3	Q96EH8	262 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	TIMD4	Q96H15	378 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	RITA1	Q96K30	269 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	TRNT1	Q96Q11	434 aa	Known RBP	5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	SLC35A5	Q9BS91	424 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	ZNF385D	Q9H6B1	395 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	B3GAT2	Q9NPZ5	323 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	TREM2	Q9NZC2	230 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	GIMAP2	Q9UG22	337 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	FBXL3	Q9UKT7	428 aa		5.76	□□□□□ -1.49
CEACAM1-208	ENST00000403461	FREM1	Q5H8C1	2179 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	ALPK2	Q86TB3	2170 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	LOC105371242	A0A075B767	164 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461		A0A0G2JK05	382 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	SLC22A23	A1A5C7	686 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	TMEM247	A6NEH6	219 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	CLDN24	A6NM45	220 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	ZNF99	A8MXY4	864 aa	Predicted RBP	5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	LYNX1	G3V0Z9	82 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	RPL36A-HNRNPH2	H7BZ11	118 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461		J3KRW8	73 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	CLIC1	O00299	241 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	ENTPD5	O75356	428 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	MPZL1	O95297	269 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	CHRNG	P07510	517 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	TFPT	P0C1Z6	253 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	LYNX1	P0DP58	116 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	TCN1	P20061	433 aa	Predicted RBP	5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	GLRX	P35754	106 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	RAD52	P43351	418 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	ALDH3B1	P43353	468 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	CLNS1A	P54105	237 aa	Known RBP	5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	NANOS3	P60323	173 aa	Known RBP	5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	DEFA6	Q01524	100 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	EMX2	Q04743	252 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	LRRC74A	Q0VAA2	488 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	MFSD13A	Q14CX5	517 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	SMU1	Q2TAY7	513 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	CEACAM16	Q2WEN9	425 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	PCGF3	Q3KNV8	242 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	ELFN2	Q5R3F8	820 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	MRPL2	Q5T653	305 aa	Known RBP	5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	DCAF12L2	Q5VW00	463 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	SAXO2	Q658L1	398 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	TMEM154	Q6P9G4	183 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	LRRC74B	Q6ZQY2	392 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	C1QL2	Q7Z5L3	287 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	MDP1	Q86V88	176 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	ANKRD46	Q86W74	232 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	EPHX4	Q8IUS5	362 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	C4orf33	Q8N1A6	199 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	RIBC1	Q8N443	379 aa	Predicted RBP	5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	LRRC17	Q8N6Y2	441 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	NOA1	Q8NC60	698 aa	Known RBP	5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	OR8J2	Q8NGG1	315 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	SLC25A36	Q96CQ1	311 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	ZIM3	Q96PE6	472 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	SLC6A7	Q99884	636 aa		5.75	□□□□□ -1.49
CEACAM1-208	ENST00000403461	MRPL37	Q9BZE1	423 aa	Known RBP	5.75	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms