RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 SSX9Q7RTT3 188 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 LUZP2Q86TE4 346 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 C12orf56Q8IXR9 622 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 GABRG1Q8N1C3 465 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 ARIH2OSQ8N7S6 290 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 PRELID2Q8N945 189 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 Q8N976 141 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 Q8N9L7 120 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 DUSP18Q8NEJ0 188 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 CCDC148Q8NFR7 591 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 OR2A1Q8NGT9 310 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 CT45A3Q8NHU0 189 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 FAM104AQ969W3 186 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 EXOSC8Q96B26 276 aaKnown RBP1.73□□□□□ -2.13
CD47-203ENST00000398258 DNAJC19Q96DA6 116 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 GALNT14Q96FL9 552 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 C11orf70Q9BRQ4 267 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 CHAC1Q9BUX1 264 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 PARP12Q9H0J9 701 aaKnown RBP1.73□□□□□ -2.13
CD47-203ENST00000398258 RPP21Q9H633 154 aaKnown RBP1.73□□□□□ -2.13
CD47-203ENST00000398258 MRPS30Q9NP92 439 aaKnown RBP1.73□□□□□ -2.13
CD47-203ENST00000398258 SLCO1B3Q9NPD5 702 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 LHX9Q9NQ69 397 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 PSG8Q9UQ74 426 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 SLC17A4Q9Y2C5 497 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 GOLT1BQ9Y3E0 138 aa1.73□□□□□ -2.13
CD47-203ENST00000398258 MTCL1Q9Y4B5 1905 aaKnown RBP1.73□□□□□ -2.13
CD47-203ENST00000398258 MN1Q10571 1320 aaPredicted RBP1.72□□□□□ -2.13
CD47-203ENST00000398258 MAP3K15Q6ZN16 1313 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 A0A096LNJ9 63 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 ZNF816-ZNF321PA0A0X1KG74 233 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 KBTBD11-OT1A0A1B0GTJ5 212 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 LYRM9A8MSI8 78 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 F6UB75 175 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 CASQ2O14958 399 aaPredicted RBP1.72□□□□□ -2.13
CD47-203ENST00000398258 CASC3O15234 703 aaKnown RBP1.72□□□□□ -2.13
CD47-203ENST00000398258 EIF3HO15372 352 aaKnown RBP eCLIP1.72□□□□□ -2.13
CD47-203ENST00000398258 CD5LO43866 347 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 HUS1O60921 280 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 CLDN11O75508 207 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 RAB3DO95716 219 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 AIFM1O95831 613 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 RETP07949 1114 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 ERCC1P07992 297 aaPredicted RBP1.72□□□□□ -2.13
CD47-203ENST00000398258 GNAO1P09471 354 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 MYL2P10916 166 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 ZNF250P15622 560 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 CNR1P21554 472 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 HOXA9P31269 272 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 ATP5OP48047 213 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 ZNF138P52744 262 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 HERVK_113P61574 105 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 NUTF2P61970 127 aaKnown RBP1.72□□□□□ -2.13
CD47-203ENST00000398258 ACTA2P62736 377 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 ACTG2P63267 376 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 ACTC1P68032 377 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 ACTA1P68133 377 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 SPAG1Q07617 926 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 SF3A2Q15428 464 aaKnown RBP1.72□□□□□ -2.13
CD47-203ENST00000398258 OR7A5Q15622 319 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 ZNF726P1Q15940 193 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 POU2AF1Q16633 256 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 UBE2UQ5VVX9 321 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 NPSR1Q6W5P4 371 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 PCP2Q8IVA1 136 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 ZNF786Q8N393 782 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 CCDC54Q8NEL0 328 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 FAM81AQ8TBF8 368 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 ZNF502Q8TBZ5 544 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 ZNF596Q8TC21 504 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 SLC7A13Q8TCU3 470 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 TMEM158Q8WZ71 300 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 IL22RA2Q969J5 263 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 CREB3L1Q96BA8 519 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 ZNF285Q96NJ3 590 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 SERPINB12Q96P63 405 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 XPO6Q96QU8 1125 aaKnown RBP1.72□□□□□ -2.13
CD47-203ENST00000398258 TAAR1Q96RJ0 339 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 BPIFA3Q9BQP9 254 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 C20orf96Q9NUD7 363 aaPredicted RBP1.72□□□□□ -2.13
CD47-203ENST00000398258 HRASLS2Q9NWW9 162 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 CCDC59Q9P031 241 aaKnown RBP1.72□□□□□ -2.13
CD47-203ENST00000398258 GCNT4Q9P109 453 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 DEC1Q9P2X7 70 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 CLN8Q9UBY8 286 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 ZNF629Q9UEG4 869 aaPredicted RBP1.72□□□□□ -2.13
CD47-203ENST00000398258 KIAA1257Q9ULG3 409 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 RAB26Q9ULW5 256 aa1.72□□□□□ -2.13
CD47-203ENST00000398258 IGLV1-36A0A0B4J1U3 117 aa1.71□□□□□ -2.14
CD47-203ENST00000398258 IGHV3-74A0A0B4J1X5 117 aa1.71□□□□□ -2.14
CD47-203ENST00000398258 TRAV25A0A0B4J276 109 aa1.71□□□□□ -2.14
CD47-203ENST00000398258 IGHV3-66A0A0C4DH42 116 aa1.71□□□□□ -2.14
CD47-203ENST00000398258 A6NDN8 102 aa1.71□□□□□ -2.14
CD47-203ENST00000398258 WRBO00258 174 aa1.71□□□□□ -2.14
CD47-203ENST00000398258 KMOO15229 486 aa1.71□□□□□ -2.14
CD47-203ENST00000398258 DPM1O60762 260 aa1.71□□□□□ -2.14
CD47-203ENST00000398258 ICOSLGO75144 302 aa1.71□□□□□ -2.14
CD47-203ENST00000398258 SLC25A27O95847 323 aa1.71□□□□□ -2.14
CD47-203ENST00000398258 HOXC4P09017 264 aaPredicted RBP1.71□□□□□ -2.14
CD47-203ENST00000398258 OR8G3PP0DMU2 310 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms