RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 TRIM36Q9NQ86 728 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 C2orf42Q9NWW7 574 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 DAPP1Q9UN19 280 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 FCF1Q9Y324 198 aaKnown RBP5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 HCFC2Q9Y5Z7 792 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 CACNA1GO43497 2377 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 PIKFYVEQ9Y2I7 2098 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 WIPF3A6NGB9 483 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 NPIPB13A6NJU9 1138 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 A8MWP6 167 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 NPIPB4C9JG80 1138 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 M0R036 132 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 LAMTOR5O43504 91 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 ACTL6AO96019 429 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 HLA-EP13747 358 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 AMD1P17707 334 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 ADRA2CP18825 462 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 TACR1P25103 407 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 S100GP29377 79 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 CALCRP30988 508 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 RAB28P51157 221 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 RAB25P57735 213 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 MZT1Q08AG7 82 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 SF3A2Q15428 464 aaKnown RBP5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 GCSAMLQ5JQS6 135 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 CLLU1OSQ5K130 101 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 RNASEKQ6P5S7 137 aaKnown RBP5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 UNQ6494/PRO21346Q6UXR6 183 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 ZNF517Q6ZMY9 492 aaPredicted RBP5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 HSD17B13Q7Z5P4 300 aaPredicted RBP5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 HORMAD2Q8N7B1 307 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 WDR36Q8NI36 951 aaKnown RBP5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 NRGNQ92686 78 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 DNASE1L2Q92874 299 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 NTNG2Q96CW9 530 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 EBPLQ9BY08 206 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 WFDC1Q9HC57 220 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 RANGRFQ9HD47 186 aaPredicted RBP5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 CRIM1Q9NZV1 1036 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 VPS29Q9UBQ0 182 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 LHX3Q9UBR4 397 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 PRSS21Q9Y6M0 314 aa5.99□□□□□ -1.45
TM9SF4-202ENST00000398022 GREB1Q4ZG55 1949 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 NPIPA5A0A0B4J1W7 369 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 OR11H12B2RN74 326 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 NPIPA5E9PKD4 350 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 NPIPA3F8WFD2 350 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 K7ERU9 68 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 P2RY10O00398 339 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 STC2O76061 302 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 RLN1P04808 185 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 CRYBA1P05813 215 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 SSTR5P35346 364 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 CHI3L1P36222 383 aaPredicted RBP5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 INPP5JQ15735 1006 aaPredicted RBP5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 Q6ZPB1 254 aaPredicted RBP5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 PARP16Q8N5Y8 322 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 SIRT6Q8N6T7 355 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 DCAF4L2Q8NA75 395 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 ST6GALNAC3Q8NDV1 305 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 OR11H1Q8NG94 326 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 OR11H2Q8NH07 326 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 NUBPLQ8TB37 319 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 RAX2Q96IS3 184 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 MSLNLQ96KJ4 702 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 AMBNQ9NP70 447 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 EXOSC4Q9NPD3 245 aaKnown RBP5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 CLN6Q9NWW5 311 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 RCC2Q9P258 522 aaKnown RBP5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 NPIPA1Q9UND3 350 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 SMG1Q96Q15 3661 aaKnown RBP5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 KMT2BQ9UMN6 2715 aaPredicted RBP5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 TRBV5-4A0A0C4DH59 114 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 TMEM213A2RRL7 107 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 SLC16A5O15375 505 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 CSO75390 466 aaKnown RBP5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 RAD51DO75771 328 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 GJB5O95377 273 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 CLDN7O95471 211 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 APOC3P02656 99 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 ETFAP13804 333 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 NME1P15531 152 aaKnown RBP5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 MAKP20794 623 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 CD72P21854 359 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 RFX3P48380 749 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 MTNR1BP49286 362 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 MMP16P51512 607 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 RPS16P62249 146 aaKnown RBP5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 SHC2P98077 582 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 ST3GAL4Q11206 333 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 PTGES3Q15185 160 aaKnown RBP5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 QPRTQ15274 297 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 EIPR1Q53HC9 387 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 SLC8B1Q6J4K2 584 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 DEF8Q6ZN54 512 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 ADIPOR2Q86V24 386 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 OR2AK2Q8NG84 335 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 OR5AK3PQ8NH89 298 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 GAL3ST3Q96A11 431 aa5.98□□□□□ -1.45
TM9SF4-202ENST00000398022 FEVQ99581 238 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms