RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 H3BSA7 217 aa24.25■■□□□ 1.47
CPNE1-203ENST00000397442 WDR1O75083 606 aa24.25■■□□□ 1.47
CPNE1-203ENST00000397442 SPARCP09486 303 aa24.25■■□□□ 1.47
CPNE1-203ENST00000397442 HSMCR30P0CW71 290 aa24.25■■□□□ 1.47
CPNE1-203ENST00000397442 GABRA1P14867 456 aa24.25■■□□□ 1.47
CPNE1-203ENST00000397442 TTKP33981 857 aa24.25■■□□□ 1.47
CPNE1-203ENST00000397442 OR12D2P58182 307 aa24.25■■□□□ 1.47
CPNE1-203ENST00000397442 ARMCX4Q5H9R4 360 aa24.25■■□□□ 1.47
CPNE1-203ENST00000397442 TMPRSS11AQ6ZMR5 421 aa24.25■■□□□ 1.47
CPNE1-203ENST00000397442 RBM24Q9BX46 236 aaKnown RBP24.25■■□□□ 1.47
CPNE1-203ENST00000397442 GPR35Q9HC97 309 aa24.25■■□□□ 1.47
CPNE1-203ENST00000397442 LAMP5Q9UJQ1 280 aa24.25■■□□□ 1.47
CPNE1-203ENST00000397442 ERVH48-1M5A8F1 160 aa24.24■■□□□ 1.47
CPNE1-203ENST00000397442 IGHV3-9P01782 118 aa24.24■■□□□ 1.47
CPNE1-203ENST00000397442 ZNF823P16415 610 aa24.24■■□□□ 1.47
CPNE1-203ENST00000397442 GCNT2Q8N0V5 402 aa24.24■■□□□ 1.47
CPNE1-203ENST00000397442 CPT1CQ8TCG5 803 aa24.24■■□□□ 1.47
CPNE1-203ENST00000397442 NABP1Q96AH0 204 aa24.24■■□□□ 1.47
CPNE1-203ENST00000397442 APH1AQ96BI3 265 aa24.24■■□□□ 1.47
CPNE1-203ENST00000397442 YIPF6Q96EC8 236 aa24.24■■□□□ 1.47
CPNE1-203ENST00000397442 C4orf36Q96KX1 117 aa24.24■■□□□ 1.47
CPNE1-203ENST00000397442 EMC7Q9NPA0 242 aa24.24■■□□□ 1.47
CPNE1-203ENST00000397442 B3GAT2Q9NPZ5 323 aa24.24■■□□□ 1.47
CPNE1-203ENST00000397442 TMEM14AQ9Y6G1 99 aa24.24■■□□□ 1.47
CPNE1-203ENST00000397442 CEPT1Q9Y6K0 416 aa24.24■■□□□ 1.47
CPNE1-203ENST00000397442 ARHGAP21Q5T5U3 1957 aa24.24■■□□□ 1.47
CPNE1-203ENST00000397442 NBEAQ8NFP9 2946 aa24.24■■□□□ 1.47
CPNE1-203ENST00000397442 SMIM31A0A1B0GVY4 71 aa24.24■■□□□ 1.47
CPNE1-203ENST00000397442 MBD3L4A6NDZ8 208 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-203ENST00000397442 MBD3L3A6NE82 208 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-203ENST00000397442 MBD3L5A6NJ08 208 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-203ENST00000397442 TGFBR2P37173 567 aa24.24■■□□□ 1.47
CPNE1-203ENST00000397442 MLLT11Q13015 90 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-203ENST00000397442 SF3B4Q15427 424 aaKnown RBP eCLIP24.24■■□□□ 1.471e-7■■■■■ 40
CPNE1-203ENST00000397442 MBD3L2Q8NHZ7 208 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-203ENST00000397442 OR6C65A6NJZ3 312 aa24.23■■□□□ 1.47
CPNE1-203ENST00000397442 FIGNL2A6NMB9 653 aa24.23■■□□□ 1.47
CPNE1-203ENST00000397442 ABOP16442 354 aa24.23■■□□□ 1.47
CPNE1-203ENST00000397442 PTGER4P35408 488 aa24.23■■□□□ 1.47
CPNE1-203ENST00000397442 ACTA2P62736 377 aa24.23■■□□□ 1.47
CPNE1-203ENST00000397442 ACTG2P63267 376 aa24.23■■□□□ 1.47
CPNE1-203ENST00000397442 ACSM1Q08AH1 577 aa24.23■■□□□ 1.47
CPNE1-203ENST00000397442 TP53I3Q53FA7 332 aa24.23■■□□□ 1.47
CPNE1-203ENST00000397442 SYS1Q8N2H4 156 aa24.23■■□□□ 1.47
CPNE1-203ENST00000397442 NELFAQ9H3P2 528 aa24.23■■□□□ 1.47
CPNE1-203ENST00000397442 CYB5R1Q9UHQ9 305 aa24.23■■□□□ 1.47
CPNE1-203ENST00000397442 J3QLW9 94 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 ZNF19P17023 458 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 ZNF84P51523 738 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 MRPS34P82930 218 aaKnown RBP24.22■■□□□ 1.47
CPNE1-203ENST00000397442 ROR2Q01974 943 aaKnown RBP24.22■■□□□ 1.47
CPNE1-203ENST00000397442 CEACAM16Q2WEN9 425 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 GFRALQ6UXV0 394 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 FAM214BQ7L5A3 538 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 LINC00346Q8IVM7 164 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 ZNF454Q8N9F8 522 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 OR10H5Q8NGA6 315 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 THEM6Q8WUY1 208 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 SNX33Q8WV41 574 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 TM9SF2Q99805 663 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 C12orf49Q9H741 205 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 ISYNA1Q9NPH2 558 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 BABAM2Q9NXR7 383 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 NDUFA13Q9P0J0 144 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 ZNF835Q9Y2P0 537 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 LHFPL6Q9Y693 200 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 SPTA1P02549 2419 aa24.22■■□□□ 1.47
CPNE1-203ENST00000397442 RPL36A-HNRNPH2H7BZ11 118 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 PSMD9O00233 223 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 MT-ND5P03915 603 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 RGS6P49758 472 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 SSX1Q16384 188 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 TSTQ16762 297 aaKnown RBP24.21■■□□□ 1.47
CPNE1-203ENST00000397442 C1orf185Q5T7R7 199 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 GPR107Q5VW38 600 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 SLC18B1Q6NT16 456 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 VASH1Q7L8A9 365 aaPredicted RBP24.21■■□□□ 1.47
CPNE1-203ENST00000397442 KLBQ86Z14 1044 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 ZNF100Q8IYN0 542 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 RPRMLQ8N4K4 120 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 ST7LQ8TDW4 575 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 ABHD6Q9BV23 337 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 FUNDC2Q9BWH2 189 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 TMEM38BQ9NVV0 291 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 MRM2Q9UI43 246 aaKnown RBP24.21■■□□□ 1.47
CPNE1-203ENST00000397442 ZGRF1Q86YA3 2104 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 PHYHO14832 338 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 TOXO94900 526 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 WNT11O96014 354 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 MSR1P21757 451 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 KIR2DL2P43627 348 aaPredicted RBP24.21■■□□□ 1.47
CPNE1-203ENST00000397442 OR3A2P47893 321 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 EIF2B1Q14232 305 aaKnown RBP24.21■■□□□ 1.47
CPNE1-203ENST00000397442 SGCAQ16586 387 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 OR2A2Q6IF42 318 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 CORO6Q6QEF8 472 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 FAM192AQ9GZU8 254 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 NAA50Q9GZZ1 169 aaKnown RBP24.21■■□□□ 1.47
CPNE1-203ENST00000397442 PRSS50Q9UI38 385 aa24.21■■□□□ 1.47
CPNE1-203ENST00000397442 NCOA6Q14686 2063 aaPredicted RBP24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms