RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 DOCK11Q5JSL3 2073 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 LOC100509620A0A075B734 347 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 ICMTO60725 284 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 ZNF32P17041 273 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 CPT2P23786 658 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 EPHA3P29320 983 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 RBMXP38159 391 aaKnown RBP12.55□□□□□ -0.4
SEC13-206ENST00000397102 MDH2P40926 338 aaKnown RBP12.55□□□□□ -0.4
SEC13-206ENST00000397102 GDI2P50395 445 aaKnown RBP12.55□□□□□ -0.4
SEC13-206ENST00000397102 KRTAP10-3P60369 221 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 PPP1CBP62140 327 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 CDK5R2Q13319 367 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 MTX3Q5HYI7 312 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 HHATQ5VTY9 493 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 MUC20Q8N307 709 aaPredicted RBP12.55□□□□□ -0.4
SEC13-206ENST00000397102 NOXO1Q8NFA2 376 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 ABHD4Q8TB40 342 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 THOC1Q96FV9 657 aaKnown RBP12.55□□□□□ -0.4
SEC13-206ENST00000397102 SSBP3Q9BWW4 388 aaPredicted RBP12.55□□□□□ -0.4
SEC13-206ENST00000397102 PAIP1Q9H074 479 aaKnown RBP12.55□□□□□ -0.4
SEC13-206ENST00000397102 WDR55Q9H6Y2 383 aaPredicted RBP12.55□□□□□ -0.4
SEC13-206ENST00000397102 EVA1AQ9H8M9 152 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 SIAEQ9HAT2 523 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 SLCO1B3Q9NPD5 702 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 NANSQ9NR45 359 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 ZIM2Q9NZV7 527 aa12.55□□□□□ -0.4
SEC13-206ENST00000397102 IGHV2-70DA0A0C4DH43 119 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 PRORSD1PA6NEY8 169 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 SLC22A31A6NKX4 558 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 CEACAM18A8MTB9 384 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 CENPBD1B2RD01 187 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 CHP2O43745 196 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 TIMM8AO60220 97 aaPredicted RBP12.54□□□□□ -0.4
SEC13-206ENST00000397102 CH25HO95992 272 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 WNT2P09544 360 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 SELEP16581 610 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 BGNP21810 368 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 TNFSF4P23510 183 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 ZNF133P52736 654 aaPredicted RBP12.54□□□□□ -0.4
SEC13-206ENST00000397102 MRPS34P82930 218 aaKnown RBP12.54□□□□□ -0.4
SEC13-206ENST00000397102 STX3Q13277 289 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 HLXQ14774 488 aaPredicted RBP12.54□□□□□ -0.4
SEC13-206ENST00000397102 PDCD1Q15116 288 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 TAF9Q16594 264 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 C10orf128Q5T292 105 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 GCNT6Q5T4J0 391 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 REEP3Q6NUK4 255 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 ZNF613Q6PF04 617 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 ZER1Q7Z7L7 766 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 TMEM86BQ8N661 226 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 POU5F2Q8N7G0 328 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 OR10S1Q8NGN2 331 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 RAB40AQ8WXH6 277 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 GTF2H4Q92759 462 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 DACT3Q96B18 629 aaPredicted RBP12.54□□□□□ -0.4
SEC13-206ENST00000397102 SEPHS2Q99611 448 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 WFDC6Q9BQY6 131 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 MRPL13Q9BYD1 178 aaKnown RBP12.54□□□□□ -0.4
SEC13-206ENST00000397102 NOX4Q9NPH5 578 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 TNFRSF19Q9NS68 423 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 SLC13A4Q9UKG4 626 aa12.54□□□□□ -0.4
SEC13-206ENST00000397102 TRPC5OSA6NMA1 111 aa12.53□□□□□ -0.4
SEC13-206ENST00000397102 HOXB9P17482 250 aaPredicted RBP12.53□□□□□ -0.4
SEC13-206ENST00000397102 POLR2JP52435 117 aaKnown RBP12.53□□□□□ -0.4
SEC13-206ENST00000397102 BPIFB3P59826 476 aa12.53□□□□□ -0.4
SEC13-206ENST00000397102 RPL15P61313 204 aaKnown RBP12.53□□□□□ -0.4
SEC13-206ENST00000397102 CDK6Q00534 326 aa12.53□□□□□ -0.4
SEC13-206ENST00000397102 PSG4Q00888 419 aa12.53□□□□□ -0.4
SEC13-206ENST00000397102 ZNF774Q6NX45 483 aa12.53□□□□□ -0.4
SEC13-206ENST00000397102 BRD3OSQ6XYD6 125 aa12.53□□□□□ -0.4
SEC13-206ENST00000397102 Q6YL49 198 aa12.53□□□□□ -0.4
SEC13-206ENST00000397102 AKR7LQ8NHP1 331 aa12.53□□□□□ -0.4
SEC13-206ENST00000397102 NABP1Q96AH0 204 aa12.53□□□□□ -0.4
SEC13-206ENST00000397102 MCHR1Q99705 422 aa12.53□□□□□ -0.4
SEC13-206ENST00000397102 SLC30A2Q9BRI3 323 aa12.53□□□□□ -0.4
SEC13-206ENST00000397102 CHIAQ9BZP6 476 aa12.53□□□□□ -0.4
SEC13-206ENST00000397102 MARCH7Q9H992 704 aa12.53□□□□□ -0.4
SEC13-206ENST00000397102 ELOVL3Q9HB03 270 aa12.53□□□□□ -0.4
SEC13-206ENST00000397102 SDR39U1Q9NRG7 319 aaPredicted RBP12.53□□□□□ -0.4
SEC13-206ENST00000397102 ZNF229Q9UJW7 825 aa12.53□□□□□ -0.4
SEC13-206ENST00000397102 PPP1R3CQ9UQK1 317 aa12.53□□□□□ -0.4
SEC13-206ENST00000397102 RNF114Q9Y508 228 aa12.53□□□□□ -0.4
SEC13-206ENST00000397102 TMEM178BH3BS89 294 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 HDAC3O15379 428 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 FMO6PO60774 539 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 ERLIN1O75477 346 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 TRMUO75648 421 aaKnown RBP12.52□□□□□ -0.41
SEC13-206ENST00000397102 CLPXO76031 633 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 TSPAN15O95858 294 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 HIST1H2ABP04908 130 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 ASAH2BP0C7U1 165 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 RPS2P15880 293 aaKnown RBP12.52□□□□□ -0.41
SEC13-206ENST00000397102 CDAP32320 146 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 ARHGDIAP52565 204 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 GNB2P62879 340 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 BST1Q10588 318 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 PSG7Q13046 419 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 NXNQ6DKJ4 435 aa12.52□□□□□ -0.41
SEC13-206ENST00000397102 TTC33Q6PID6 262 aaPredicted RBP12.52□□□□□ -0.41
SEC13-206ENST00000397102 HIST3H2AQ7L7L0 130 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms