RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 APEHP13798 732 aaKnown RBP12.54□□□□□ -0.4
NUP98-204ENST00000397004 GRK6P43250 576 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 ATP1B3P54709 279 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 INSM1Q01101 510 aaPredicted RBP12.54□□□□□ -0.4
NUP98-204ENST00000397004 MCATQ8IVS2 390 aaKnown RBP12.54□□□□□ -0.4
NUP98-204ENST00000397004 STEAP2Q8NFT2 490 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 ZNF775Q96BV0 537 aaPredicted RBP12.54□□□□□ -0.4
NUP98-204ENST00000397004 CMBLQ96DG6 245 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 SLC41A2Q96JW4 573 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 SLC19A3Q9BZV2 496 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 Q9N2J8 555 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 TAS2R4Q9NYW5 299 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 GRHPRQ9UBQ7 328 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 TNFSF18Q9UNG2 199 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 LOC100289279A0A1B0GTE1 492 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 FITM1A5D6W6 292 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 OR14I1A6ND48 311 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 C2orf74A8MZ97 194 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 TEX30Q5JUR7 227 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 GLYATL3Q5SZD4 288 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 TMEM225Q6GV28 225 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 C11orf88Q6PI97 169 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 POMZP3Q6PJE2 187 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 SDR16C5Q8N3Y7 309 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 C8orf44Q96CB5 159 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 SESN1Q9Y6P5 492 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 DMDP11532 3685 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 C11orf98E9PRG8 122 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 SOX1O00570 391 aaPredicted RBP12.53□□□□□ -0.4
NUP98-204ENST00000397004 LDLRAD4O15165 306 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 SLC25A12O75746 678 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 TACR3P29371 465 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 EGR3Q06889 387 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 ZNF169Q14929 603 aaPredicted RBP12.53□□□□□ -0.4
NUP98-204ENST00000397004 ATXN7L3Q14CW9 347 aaPredicted RBP12.53□□□□□ -0.4
NUP98-204ENST00000397004 PRR22Q8IZ63 422 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 C12orf45Q8N5I9 185 aaPredicted RBP12.53□□□□□ -0.4
NUP98-204ENST00000397004 GVQW1Q8N7I0 195 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 MICU1Q9BPX6 476 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 OR10H1Q9Y4A9 318 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 HOXC4P09017 264 aaPredicted RBP12.53□□□□□ -0.4
NUP98-204ENST00000397004 IGFBP3P17936 291 aaPredicted RBP12.53□□□□□ -0.4
NUP98-204ENST00000397004 SLC17A1Q14916 467 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 WBP2NLQ6ICG8 309 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 OR2W3Q7Z3T1 314 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 LINC00518Q8N0U6 118 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 PHOSPHO1Q8TCT1 267 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 OR8B4Q96RC9 309 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 INTS14Q96SY0 518 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 GABRG3Q99928 467 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 PRMT8Q9NR22 394 aaPredicted RBP12.53□□□□□ -0.4
NUP98-204ENST00000397004 MSRAQ9UJ68 235 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 SLC5A6Q9Y289 635 aa12.53□□□□□ -0.4
NUP98-204ENST00000397004 GPR31O00270 319 aa12.52□□□□□ -0.4
NUP98-204ENST00000397004 CSN2P05814 226 aa12.52□□□□□ -0.4
NUP98-204ENST00000397004 CD37P11049 281 aa12.52□□□□□ -0.4
NUP98-204ENST00000397004 MGMTP16455 207 aa12.52□□□□□ -0.4
NUP98-204ENST00000397004 PRKACAP17612 351 aa12.52□□□□□ -0.4
NUP98-204ENST00000397004 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.52□□□□□ -0.4
NUP98-204ENST00000397004 PRTGQ2VWP7 1150 aa12.52□□□□□ -0.4
NUP98-204ENST00000397004 TMPPEQ6ZT21 453 aa12.52□□□□□ -0.4
NUP98-204ENST00000397004 OR5M8Q8NGP6 311 aa12.52□□□□□ -0.4
NUP98-204ENST00000397004 TSEN15Q8WW01 171 aaKnown RBP12.52□□□□□ -0.4
NUP98-204ENST00000397004 NXF5Q9H1B4 397 aaKnown RBP12.52□□□□□ -0.4
NUP98-204ENST00000397004 TMEM185BQ9H7F4 350 aa12.52□□□□□ -0.4
NUP98-204ENST00000397004 GMEB2Q9UKD1 530 aa12.52□□□□□ -0.4
NUP98-204ENST00000397004 TMED7Q9Y3B3 224 aa12.52□□□□□ -0.4
NUP98-204ENST00000397004 FREM2Q5SZK8 3169 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 SEC16AO15027 2179 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 LOC100509620A0A075B734 347 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 TMEM235A6NFC5 223 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 TPPPO94811 219 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 RAB3DO95716 219 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 GP1BAP07359 652 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 CTLA4P16410 223 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 ANOS1P23352 680 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 DEFA5Q01523 94 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 EIF2B5Q13144 721 aaKnown RBP12.52□□□□□ -0.41
NUP98-204ENST00000397004 SERTAD2Q14140 314 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 NKPD1Q17RQ9 610 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 PABPC1L2AQ5JQF8 200 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 MARCH3Q86UD3 253 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 KCNRGQ8N5I3 272 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 OR13H1Q8NG92 308 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 G6PC3Q9BUM1 346 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 OBP2AQ9NY56 170 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 TAS2R8Q9NYW2 309 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 MYO9BQ13459 2157 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 RP1P56715 2156 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 CPED1A4D0V7 1026 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 PRAMEF2O60811 474 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 SRSF10O75494 262 aaKnown RBP12.52□□□□□ -0.41
NUP98-204ENST00000397004 FAUP35544 74 aaKnown RBP12.52□□□□□ -0.41
NUP98-204ENST00000397004 SCAND1P57086 179 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 RAB11BQ15907 218 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 FDX2Q6P4F2 183 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 TMEM88Q6PEY1 159 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 FAM219AQ8IW50 185 aa12.52□□□□□ -0.41
NUP98-204ENST00000397004 PAQR4Q8N4S7 273 aaPredicted RBP12.52□□□□□ -0.41
NUP98-204ENST00000397004 BHLHE23Q8NDY6 225 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms