RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 CASRP41180 1078 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 ACAA2P42765 397 aaKnown RBP8.91□□□□□ -0.98
TRIM39-203ENST00000396547 PTGFRP43088 359 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 GRK6P43250 576 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 LSSP48449 732 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 PPM1FP49593 454 aaPredicted RBP8.91□□□□□ -0.98
TRIM39-203ENST00000396547 IL13RA1P78552 427 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 SMCO1Q147U7 214 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 TGIF1Q15583 401 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 ZNF77Q15935 545 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 GLYATL3Q5SZD4 288 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 FBXO42Q6P3S6 717 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 ACOT7LQ6ZUV0 252 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 ARMC10Q8N2F6 343 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 ELP5Q8TE02 316 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 C15orf40Q8WUR7 153 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 SLC19A3Q9BZV2 496 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 TRIM2Q9C040 744 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 SRMSQ9H3Y6 488 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 SFXN1Q9H9B4 322 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 LRIT1Q9P2V4 623 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 CD207Q9UJ71 328 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 SERTAD3Q9UJW9 196 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 DAPP1Q9UN19 280 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 TNFSF18Q9UNG2 199 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 ETV7Q9Y603 341 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 MPDZO75970 2070 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 RNF222A6NCQ9 220 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 CDC40O60508 579 aaKnown RBP eCLIP8.91□□□□□ -0.98
TRIM39-203ENST00000396547 CTSVO60911 334 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 UPK3AO75631 287 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 SNAPC5O75971 98 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 CSTAP01040 98 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 CEBPBP17676 345 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 RFC3P40938 356 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 SGCGQ13326 291 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 NKAPLQ5M9Q1 402 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 GVQW1Q8N7I0 195 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 OR1J4Q8NGS1 313 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 ROBO4Q8WZ75 1007 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 GAL3ST3Q96A11 431 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 SPACA7Q96KW9 195 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 UTP23Q9BRU9 249 aaKnown RBP8.91□□□□□ -0.98
TRIM39-203ENST00000396547 CERS4Q9HA82 394 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 TMED7Q9Y3B3 224 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 LRRK1Q38SD2 2015 aa8.91□□□□□ -0.98
TRIM39-203ENST00000396547 MBTPS2O43462 519 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 BRINP1O60477 761 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 IGKV1D-16P01601 117 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 FABP1P07148 127 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 PPP1R1AQ13522 171 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 PDGFRLQ15198 375 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 ZNF528Q3MIS6 628 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 MOGAT2Q3SYC2 334 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 EXOSC6Q5RKV6 272 aaKnown RBP8.9□□□□□ -0.98
TRIM39-203ENST00000396547 FCRL6Q6DN72 434 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 ULK3Q6PHR2 472 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 TMPPEQ6ZT21 453 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 MDGA2Q7Z553 956 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 PARGQ86W56 976 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 CLEC1AQ8NC01 280 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 CCL4L1Q8NHW4 92 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 ZNF417Q8TAU3 575 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 MOGAT1Q96PD6 335 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 CST11Q9H112 138 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 SYT4Q9H2B2 425 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 ELOVL3Q9HB03 270 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 PHPT1Q9NRX4 125 aaPredicted RBP8.9□□□□□ -0.98
TRIM39-203ENST00000396547 KCNG2Q9UJ96 466 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 MRPS23Q9Y3D9 190 aaKnown RBP8.9□□□□□ -0.98
TRIM39-203ENST00000396547 SPEGQ15772 3267 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 C1QTNF3-AMACRE9PGA6 284 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 SRPX2O60687 465 aaPredicted RBP8.9□□□□□ -0.98
TRIM39-203ENST00000396547 TAS2R19P59542 299 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 DEFB110Q30KQ9 67 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 ITPRIPL2Q3MIP1 535 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 ADAMTSL4Q6UY14 1074 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 DPY19L2P2Q6ZN68 376 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 OR5M8Q8NGP6 311 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 OR4C3Q8NH37 302 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 GLYATL2Q8WU03 294 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 PHYHIPQ92561 330 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 SEH1LQ96EE3 360 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 FAM117AQ9C073 453 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 DNAJB12Q9NXW2 375 aaKnown RBP8.9□□□□□ -0.98
TRIM39-203ENST00000396547 CSAG2Q9Y5P2 127 aa8.9□□□□□ -0.98
TRIM39-203ENST00000396547 HEATR5AQ86XA9 2040 aa8.9□□□□□ -0.99
TRIM39-203ENST00000396547 NOTCH4Q99466 2003 aa8.9□□□□□ -0.99
TRIM39-203ENST00000396547 OR4C45A6NMZ5 311 aa8.89□□□□□ -0.99
TRIM39-203ENST00000396547 OR2F2O95006 317 aa8.89□□□□□ -0.99
TRIM39-203ENST00000396547 ACAA1P09110 424 aaPredicted RBP8.89□□□□□ -0.99
TRIM39-203ENST00000396547 PI3P19957 117 aa8.89□□□□□ -0.99
TRIM39-203ENST00000396547 PPT1P50897 306 aa8.89□□□□□ -0.99
TRIM39-203ENST00000396547 POLR2GP62487 172 aaKnown RBP eCLIP8.89□□□□□ -0.99
TRIM39-203ENST00000396547 OR2F1Q13607 317 aa8.89□□□□□ -0.99
TRIM39-203ENST00000396547 ENPP2Q13822 863 aa8.89□□□□□ -0.99
TRIM39-203ENST00000396547 PEA15Q15121 130 aa8.89□□□□□ -0.99
TRIM39-203ENST00000396547 WDR38Q5JTN6 314 aa8.89□□□□□ -0.99
TRIM39-203ENST00000396547 LINC01590Q5TEZ4 76 aa8.89□□□□□ -0.99
TRIM39-203ENST00000396547 VITQ6UXI7 678 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms