RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 HRGP04196 525 aa15.04■□□□□ -0
NUP50-202ENST00000396096 CD37P11049 281 aa15.04■□□□□ -0
NUP50-202ENST00000396096 TCEA1P23193 301 aaKnown RBP15.04■□□□□ -0
NUP50-202ENST00000396096 STOMP27105 288 aa15.04■□□□□ -0
NUP50-202ENST00000396096 TAS2R20P59543 309 aa15.04■□□□□ -0
NUP50-202ENST00000396096 MFGE8Q08431 387 aaPredicted RBP15.04■□□□□ -0
NUP50-202ENST00000396096 FCN2Q15485 313 aa15.04■□□□□ -0
NUP50-202ENST00000396096 GSG1Q2KHT4 349 aa15.04■□□□□ -0
NUP50-202ENST00000396096 OTPQ5XKR4 325 aa15.04■□□□□ -0
NUP50-202ENST00000396096 OLFML2AQ68BL7 652 aa15.04■□□□□ -0
NUP50-202ENST00000396096 DEGS2Q6QHC5 323 aa15.04■□□□□ -0
NUP50-202ENST00000396096 NHLRC1Q6VVB1 395 aa15.04■□□□□ -0
NUP50-202ENST00000396096 SERPINA12Q8IW75 414 aa15.04■□□□□ -0
NUP50-202ENST00000396096 PMEPA1Q969W9 287 aa15.04■□□□□ -0
NUP50-202ENST00000396096 OR51J1Q9H342 316 aa15.04■□□□□ -0
NUP50-202ENST00000396096 EMC7Q9NPA0 242 aa15.04■□□□□ -0
NUP50-202ENST00000396096 PISDQ9UG56 409 aa15.04■□□□□ -0
NUP50-202ENST00000396096 NXT1Q9UKK6 140 aaKnown RBP15.04■□□□□ -0
NUP50-202ENST00000396096 COLQQ9Y215 455 aaPredicted RBP15.04■□□□□ -0
NUP50-202ENST00000396096 R4GMQ9 66 aa15.04■□□□□ -0
NUP50-202ENST00000396096 FREM3P0C091 2139 aa15.04■□□□□ -0
NUP50-202ENST00000396096 LOC102723996A0A087X1L8 192 aa15.03■□□□□ -0
NUP50-202ENST00000396096 ANKRD20A5PA0PJZ0 165 aa15.03■□□□□ -0
NUP50-202ENST00000396096 FAM47E-STBD1D6RA91 191 aa15.03■□□□□ -0
NUP50-202ENST00000396096 KHDRBS3O75525 346 aaKnown RBP15.03■□□□□ -0
NUP50-202ENST00000396096 OR2J2O76002 312 aa15.03■□□□□ -0
NUP50-202ENST00000396096 GLSO94925 669 aaPredicted RBP15.03■□□□□ -0
NUP50-202ENST00000396096 WNT11O96014 354 aa15.03■□□□□ -0
NUP50-202ENST00000396096 ZNF823P16415 610 aa15.03■□□□□ -0
NUP50-202ENST00000396096 FSTP19883 344 aa15.03■□□□□ -0
NUP50-202ENST00000396096 RPS15P62841 145 aaKnown RBP15.03■□□□□ -0
NUP50-202ENST00000396096 ODF4Q2M2E3 257 aa15.03■□□□□ -0
NUP50-202ENST00000396096 Q5BKY6 102 aa15.03■□□□□ -0
NUP50-202ENST00000396096 FAM69BQ5VUD6 431 aa15.03■□□□□ -0
NUP50-202ENST00000396096 OR7E24Q6IFN5 339 aa15.03■□□□□ -0
NUP50-202ENST00000396096 FAM166AQ6J272 317 aa15.03■□□□□ -0
NUP50-202ENST00000396096 MTFR2Q6P444 385 aa15.03■□□□□ -0
NUP50-202ENST00000396096 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.03■□□□□ -0
NUP50-202ENST00000396096 WDFY1Q8IWB7 410 aa15.03■□□□□ -0
NUP50-202ENST00000396096 SLC7A5P1Q8MH63 180 aa15.03■□□□□ -0
NUP50-202ENST00000396096 OR10G3Q8NGC4 313 aa15.03■□□□□ -0
NUP50-202ENST00000396096 ST7LQ8TDW4 575 aa15.03■□□□□ -0
NUP50-202ENST00000396096 ELP5Q8TE02 316 aa15.03■□□□□ -0
NUP50-202ENST00000396096 METTL7AQ9H8H3 244 aa15.03■□□□□ -0
NUP50-202ENST00000396096 RCE1Q9Y256 329 aa15.03■□□□□ -0
NUP50-202ENST00000396096 XRCC3O43542 346 aa15.03■□□□□ -0
NUP50-202ENST00000396096 MPZL1O95297 269 aa15.03■□□□□ -0
NUP50-202ENST00000396096 POU3F1Q03052 451 aaPredicted RBP15.03■□□□□ -0
NUP50-202ENST00000396096 PHF19Q5T6S3 580 aa15.03■□□□□ -0
NUP50-202ENST00000396096 ASPHD2Q6ICH7 369 aa15.03■□□□□ -0
NUP50-202ENST00000396096 OR2M3Q8NG83 312 aa15.03■□□□□ -0
NUP50-202ENST00000396096 DEDD2Q8WXF8 326 aa15.03■□□□□ -0
NUP50-202ENST00000396096 SPACA9Q96E40 222 aaPredicted RBP15.03■□□□□ -0
NUP50-202ENST00000396096 GON7Q9BXV9 100 aa15.03■□□□□ -0
NUP50-202ENST00000396096 SLC17A5Q9NRA2 495 aa15.03■□□□□ -0
NUP50-202ENST00000396096 SERINC1Q9NRX5 453 aa15.03■□□□□ -0
NUP50-202ENST00000396096 DHDHQ9UQ10 334 aa15.03■□□□□ -0
NUP50-202ENST00000396096 H0YC42 278 aa15.02■□□□□ -0
NUP50-202ENST00000396096 SLC17A2O00624 439 aa15.02■□□□□ -0
NUP50-202ENST00000396096 ISG15P05161 165 aa15.02■□□□□ -0
NUP50-202ENST00000396096 IGFBP3P17936 291 aaPredicted RBP15.02■□□□□ -0
NUP50-202ENST00000396096 S100A1P23297 94 aa15.02■□□□□ -0
NUP50-202ENST00000396096 FMODQ06828 376 aa15.02■□□□□ -0
NUP50-202ENST00000396096 TRA2AQ13595 282 aaKnown RBP eCLIP15.02■□□□□ -0
NUP50-202ENST00000396096 PCOLCEQ15113 449 aa15.02■□□□□ -0
NUP50-202ENST00000396096 ANKRD16Q6P6B7 361 aa15.02■□□□□ -0
NUP50-202ENST00000396096 NDUFAF7Q7L592 441 aa15.02■□□□□ -0
NUP50-202ENST00000396096 FGD2Q7Z6J4 655 aa15.02■□□□□ -0
NUP50-202ENST00000396096 MAFAQ8NHW3 353 aaPredicted RBP15.02■□□□□ -0
NUP50-202ENST00000396096 ASB5Q8WWX0 329 aa15.02■□□□□ -0
NUP50-202ENST00000396096 GCDHQ92947 438 aaPredicted RBP15.02■□□□□ -0
NUP50-202ENST00000396096 C5orf34Q96MH7 638 aa15.02■□□□□ -0
NUP50-202ENST00000396096 RASL10BQ96S79 203 aa15.02■□□□□ -0
NUP50-202ENST00000396096 CMKLR1Q99788 373 aa15.02■□□□□ -0
NUP50-202ENST00000396096 DEFB126Q9BYW3 111 aa15.02■□□□□ -0
NUP50-202ENST00000396096 B3GAT1Q9P2W7 334 aa15.02■□□□□ -0
NUP50-202ENST00000396096 RPH3AQ9Y2J0 694 aaPredicted RBP15.02■□□□□ -0
NUP50-202ENST00000396096 LAMA1P25391 3075 aa15.02□□□□□ -0.01
NUP50-202ENST00000396096 RALGAPA1Q6GYQ0 2036 aa15.02□□□□□ -0.01
NUP50-202ENST00000396096 NTN3O00634 580 aaPredicted RBP15.01□□□□□ -0.01
NUP50-202ENST00000396096 GMDSO60547 372 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 PSMB1P20618 241 aaKnown RBP15.01□□□□□ -0.01
NUP50-202ENST00000396096 MYBPHQ13203 477 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 TOMM20Q15388 145 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 TMEM225Q6GV28 225 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 Q7L0L9 218 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 MDGA2Q7Z553 956 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 GLB1L2Q8IW92 636 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 FADS6Q8N9I5 356 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 OR11H7Q8NGC8 314 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 RELTQ969Z4 430 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 HYLS1Q96M11 299 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 GUCD1Q96NT3 240 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 C20orf85Q9H1P6 137 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 AKIRIN1Q9H9L7 192 aaPredicted RBP15.01□□□□□ -0.01
NUP50-202ENST00000396096 G6PC2Q9NQR9 355 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 MED29Q9NX70 200 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 STMN3Q9NZ72 180 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 KLK11Q9UBX7 282 aa15.01□□□□□ -0.01
NUP50-202ENST00000396096 IGKV1D-43A0A0B4J1Z2 117 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms