RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 OR52I2Q8NH67 350 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 TMEM239Q8WW34 195 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 MVB12AQ96EY5 273 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 SLC35A4Q96G79 324 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 SLC46A1Q96NT5 459 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 ADOQ96SZ5 270 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 OCSTAMPQ9BR26 566 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 DUSP15Q9H1R2 295 aaPredicted RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 TSPAN10Q9H1Z9 355 aaPredicted RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 HRASLSQ9HDD0 168 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 DUSP22Q9NRW4 184 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 SLC6A13Q9NSD5 602 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 FBXL4Q9UKA2 621 aa5.2□□□□□ -1.58
RFFL-202ENST00000394597 PTRH2Q9Y3E5 179 aaKnown RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 PCYT1BQ9Y5K3 369 aaPredicted RBP5.2□□□□□ -1.58
RFFL-202ENST00000394597 BORCS7-ASMTA0A0B4J1R7 106 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 SLC22A31A6NKX4 558 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ZFAND5O76080 213 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 OR2F2O95006 317 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 MT-ND4LP03901 98 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ZNF823P16415 610 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ZNF25P17030 456 aaPredicted RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 BDKRB2P30411 391 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 SOX18P35713 384 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 NAA10P41227 235 aaPredicted RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 FOLR3P41439 243 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 FASLGP48023 281 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 PDX1P52945 283 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 CLDN12P56749 244 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 CYCSP99999 105 aaKnown RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 OR2F1Q13607 317 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 OR1Q1Q15612 314 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 SGCAQ16586 387 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 NKPD1Q17RQ9 610 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 RNASE10Q5GAN6 216 aaKnown RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 NHLRC3Q5JS37 347 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 FCRL6Q6DN72 434 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 NHLRC1Q6VVB1 395 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ZNF574Q6ZN55 896 aaPredicted RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 OR2W3Q7Z3T1 314 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ZNF584Q8IVC4 421 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 KDM8Q8N371 416 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 AMER3Q8N944 861 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 IFI44Q8TCB0 444 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 SLC7A13Q8TCU3 470 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 THAP4Q8WY91 577 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 SMPDL3BQ92485 455 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 SENP5Q96HI0 755 aaPredicted RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 PRR14Q9BWN1 585 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 EGLN3Q9H6Z9 239 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 PPP1R3EQ9H7J1 279 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 AUNIPQ9H7T9 357 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 BCO1Q9HAY6 547 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 SLC52A3Q9NQ40 469 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ACER3Q9NUN7 267 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 GRHPRQ9UBQ7 328 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 URGCP-MRPS24S4R325 110 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 TMEM82A0PJX8 343 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 CBY3A6NI87 242 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 NUDT19A8MXV4 375 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ZNF587BE7ETH6 402 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 DNASE2O00115 360 aaPredicted RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 F12P00748 615 aaPredicted RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 IGF2P01344 180 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 FGF2P09038 288 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 PNMTP11086 282 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ERGP11308 486 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 HOXB3P14651 431 aaPredicted RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 MAPK3P27361 379 aaPredicted RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 OTX2P32243 289 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 OR10A3P58181 314 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 IL13RA1P78552 427 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ZP2Q05996 745 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 GUCA2BQ16661 112 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 DUSP5Q16690 384 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 MRPL2Q5T653 305 aaKnown RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 VN1R4Q7Z5H5 301 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 COMMD2Q86X83 199 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 MRPL41Q8IXM3 137 aaKnown RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 DTD1Q8TEA8 209 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 FBLIM1Q8WUP2 373 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 TAAR8Q969N4 342 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 BSCL2Q96G97 398 aaPredicted RBP5.19□□□□□ -1.58
RFFL-202ENST00000394597 MS4A3Q96HJ5 214 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 TAS2R5Q9NYW4 299 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ADAM18Q9Y3Q7 739 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 A0A087WV62 115 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ANKRD61A6NGH8 418 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 ZNF726A6NNF4 738 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 MPTX1A8MV57 137 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 SNRPGP15A8MWD9 76 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 PSMD9O00233 223 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 TGOLN2O43493 480 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 TNFSF14O43557 240 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 DPM1O60762 260 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 MAS1P04201 325 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 WNT1P04628 370 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 SERPINA5P05154 406 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 TACSTD2P09758 323 aa5.19□□□□□ -1.58
RFFL-202ENST00000394597 PGAM2P15259 253 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms