RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 OPN5Q6U736 354 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 PLET1Q6UQ28 207 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 RAB11FIP2Q7L804 512 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 PPP1R32Q7Z5V6 425 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 OR6F1Q8NGZ6 308 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 GPR148Q8TDV2 347 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 TSEN15Q8WW01 171 aaKnown RBP13.45□□□□□ -0.26
GPC3-202ENST00000394299 PHYHIPQ92561 330 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 ITPKCQ96DU7 683 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 DMRTB1Q96MA1 342 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 FRMD6Q96NE9 622 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 MFRPQ9BY79 579 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 ABCG5Q9H222 651 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 AUNIPQ9H7T9 357 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 PTGES2Q9H7Z7 377 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 MRPL15Q9P015 296 aaKnown RBP13.45□□□□□ -0.26
GPC3-202ENST00000394299 KLHL13Q9P2N7 655 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 TCFL5Q9UL49 500 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 PHF3Q92576 2039 aaKnown RBP13.45□□□□□ -0.26
GPC3-202ENST00000394299 IGHV3-15A0A0B4J1V0 119 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 A0A0G2JMM0 328 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 A0A1W2PPB8 328 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 A0A1W2PRS3 328 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 A6NIZ1 184 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 TMEM212A6NML5 194 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 KIR3DP1A8MWS1 328 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 CDX4O14627 284 aaPredicted RBP13.45□□□□□ -0.26
GPC3-202ENST00000394299 PHYHO14832 338 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 ZNF254O75437 659 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 TMIGD3P0DMS9 266 aaPredicted RBP13.45□□□□□ -0.26
GPC3-202ENST00000394299 RAP1BP61224 184 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 RAP1AP62834 184 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 ROM1Q03395 351 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 TEX30Q5JUR7 227 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 TMPRSS12Q86WS5 348 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 OR52N5Q8NH56 324 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 HAVCR2Q8TDQ0 301 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 CT55Q8WUE5 264 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 CHAC2Q8WUX2 184 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 C11orf40Q8WZ69 217 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 YIPF5Q969M3 257 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 KCNK15Q9H427 330 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 EMC9Q9Y3B6 208 aa13.45□□□□□ -0.26
GPC3-202ENST00000394299 TRBV5-7A0A0A0MS05 114 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 B4E171 279 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 PDCD5O14737 125 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 LMX1BO60663 402 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 CD59P13987 128 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 TSPAN7P41732 249 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 MLF1P58340 268 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 ZNF544Q6NX49 715 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 MZT2BQ6NZ67 158 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 UEVLDQ8IX04 471 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 ST7LQ8TDW4 575 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 ASB17Q8WXJ9 295 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 PAIP2BQ9ULR5 123 aaKnown RBP13.44□□□□□ -0.26
GPC3-202ENST00000394299 ZIC3O60481 467 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 CYC1P08574 325 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 DNASE1L1P49184 302 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 RIDAP52758 137 aaKnown RBP13.44□□□□□ -0.26
GPC3-202ENST00000394299 RASGEF1BQ0VAM2 473 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 KCNJ8Q15842 424 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 SLC22A10Q63ZE4 541 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 KCTD18Q6PI47 426 aaPredicted RBP13.44□□□□□ -0.26
GPC3-202ENST00000394299 GLB1L2Q8IW92 636 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 DUSP18Q8NEJ0 188 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 ANGPTL4Q9BY76 406 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 MRPL13Q9BYD1 178 aaKnown RBP13.44□□□□□ -0.26
GPC3-202ENST00000394299 SEC61A2Q9H9S3 476 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 EMC7Q9NPA0 242 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 HPF1Q9NWY4 346 aa13.44□□□□□ -0.26
GPC3-202ENST00000394299 COL27A1Q8IZC6 1860 aaPredicted RBP13.43□□□□□ -0.26
GPC3-202ENST00000394299 SULT2B1O00204 365 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 GPR171O14626 319 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 TRAF3IP2O43734 574 aaPredicted RBP13.43□□□□□ -0.26
GPC3-202ENST00000394299 KHDRBS3O75525 346 aaKnown RBP13.43□□□□□ -0.26
GPC3-202ENST00000394299 UBL3O95164 117 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 BTCP35070 178 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 BLVRAP53004 296 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 TATDN3Q17R31 274 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 TBRG1Q3YBR2 411 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 ATAD3CQ5T2N8 411 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 RAET1LQ5VY80 246 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 C6orf15Q6UXA7 325 aaPredicted RBP13.43□□□□□ -0.26
GPC3-202ENST00000394299 CATSPERDQ86XM0 798 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 SYNPRQ8TBG9 265 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 PAQR8Q8TEZ7 354 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 MCHR2Q969V1 340 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 ST6GAL2Q96JF0 529 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 FOXJ2Q9P0K8 574 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 RTTNQ86VV8 2226 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 PCSK5Q92824 1860 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 A0A1W2PPL8 197 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 ANXA2P2A6NMY6 339 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 C9orf172C9J069 976 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 ANXA2P07355 339 aaKnown RBP13.43□□□□□ -0.26
GPC3-202ENST00000394299 AVPR2P30518 371 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 TOMM20Q15388 145 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 UBE2NLQ5JXB2 153 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 FDX2Q6P4F2 183 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms