RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 POLE4Q9NR33 117 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 LAMP3Q9UQV4 416 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 COA3Q9Y2R0 106 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 CSMD2Q7Z408 3487 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 PLCE1Q9P212 2302 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 IGHV2OR16-5A0A0B4J2B6 119 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 IQCMA0A1B0GVH7 501 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 H3BN98 237 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 TP53P04637 393 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 DANCRP0C864 163 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 CALCRP30988 508 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 ART1P52961 327 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 HSF2Q03933 536 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 KPNB1Q14974 876 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 B3GLCTQ6Y288 498 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 HIPK1Q86Z02 1210 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 GLB1L2Q8IW92 636 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 FBXL14Q8N1E6 418 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 LNX2Q8N448 690 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 TEX47Q8TBZ9 253 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 FOXC2Q99958 501 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 WACQ9BTA9 647 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 C1orf198Q9H425 327 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 REV1Q9UBZ9 1251 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 B9D1Q9UPM9 204 aa16.48■□□□□ 0.23
PDLIM7-204ENST00000393546 MYO9AB2RTY4 2548 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 C12orf71A8MTZ7 269 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 VSTM5A8MXK1 200 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 SMPD2O60906 423 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 MMP7P09237 267 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 ZNF32P17041 273 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 APOBEC3AP31941 199 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 TTKP33981 857 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 CENPAP49450 140 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 PGGHGQ32M88 737 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 SLC36A3Q495N2 470 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 AGAP6Q5VW22 663 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 ZNF544Q6NX49 715 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 AMIGO2Q86SJ2 522 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 SYT9Q86SS6 491 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 NPEPL1Q8NDH3 523 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 SDR9C7Q8NEX9 313 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 OR1J2Q8NGS2 313 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 DNAJC9Q8WXX5 260 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 LRTOMTQ8WZ04 291 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 FBXO17Q96EF6 278 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 FOXN4Q96NZ1 517 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 TSSK2Q96PF2 358 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 CXorf56Q9H5V9 222 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 KIF17Q9P2E2 1029 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 KLHL21Q9UJP4 597 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 SPEF1Q9Y4P9 236 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 TIMM10BQ9Y5J6 103 aa16.47■□□□□ 0.23
PDLIM7-204ENST00000393546 OR6C68A6NDL8 312 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 G3V2T6 193 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 SCG5P05408 212 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 SOD3P08294 240 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 OSMP13725 252 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 POU1F1P28069 291 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 HGFACQ04756 655 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 PABPC1L2AQ5JQF8 200 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 ZFP1Q6P2D0 407 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 ZNF584Q8IVC4 421 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 ALDH16A1Q8IZ83 802 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 OR6V1Q8N148 313 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 MUC15Q8N387 334 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 OR4Q3Q8NH05 313 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 IGFBPL1Q8WX77 278 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 PYDC1Q8WXC3 89 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 ZNF416Q9BWM5 594 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 EMC7Q9NPA0 242 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 RPRD1BQ9NQG5 326 aaKnown RBP16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 FKBP7Q9Y680 259 aa16.46■□□□□ 0.23
PDLIM7-204ENST00000393546 DCTN6O00399 190 aa16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 IFNGP01579 166 aa16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 ZNF35P13682 527 aa16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 APLNRP35414 380 aa16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 LSM6P62312 80 aaKnown RBP16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 PSG4Q00888 419 aa16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 GALK2Q01415 458 aa16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 DAG1Q14118 895 aa16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 ENDOGQ14249 297 aaKnown RBP16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 UGT2A3Q6UWM9 527 aa16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 DTX2Q86UW9 622 aa16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 ZBTB46Q86UZ6 589 aa16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 ZDHHC13Q8IUH4 622 aa16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 SLC30A7Q8NEW0 376 aa16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 NUP37Q8NFH4 326 aa16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 CENPNQ96H22 339 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 TRAF4Q9BUZ4 470 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 GRIP2Q9C0E4 1043 aa16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 RACGAP1Q9H0H5 632 aa16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 CDH20Q9HBT6 801 aa16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 CA10Q9NS85 328 aa16.45■□□□□ 0.22
PDLIM7-204ENST00000393546 IGLV1-36A0A0B4J1U3 117 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 MPZL1O95297 269 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 CD8AP01732 235 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 ZNF23P17027 643 aa16.44■□□□□ 0.22
PDLIM7-204ENST00000393546 NR4A1P22736 598 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms