RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 OR1J2Q8NGS2 313 aa14.13□□□□□ -0.15
PTPRK-208ENST00000392449 SNX33Q8WV41 574 aa14.13□□□□□ -0.15
PTPRK-208ENST00000392449 BCL2L14Q9BZR8 327 aa14.13□□□□□ -0.15
PTPRK-208ENST00000392449 WNT5BQ9H1J7 359 aa14.13□□□□□ -0.15
PTPRK-208ENST00000392449 A0A1W2PPL8 197 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 TPD52L2O43399 206 aaKnown RBP14.12□□□□□ -0.15
PTPRK-208ENST00000392449 RGS9O75916 674 aaPredicted RBP14.12□□□□□ -0.15
PTPRK-208ENST00000392449 ZNF682O95780 498 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 SCG5P05408 212 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 MSMBP08118 114 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 TMEM33P57088 247 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 RPL27P61353 136 aaKnown RBP14.12□□□□□ -0.15
PTPRK-208ENST00000392449 MRPS11P82912 194 aaKnown RBP14.12□□□□□ -0.15
PTPRK-208ENST00000392449 THEM4Q5T1C6 240 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 TBPL2Q6SJ96 375 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 THSD4Q6ZMP0 1018 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 USP51Q70EK9 711 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 SLC15A3Q8IY34 581 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 IPCEF1Q8WWN9 437 aaPredicted RBP14.12□□□□□ -0.15
PTPRK-208ENST00000392449 TMEM186Q96B77 213 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 LRRC37BQ96QE4 947 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 ZNF416Q9BWM5 594 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 LRMDAQ9H2I8 198 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 KCNN2Q9H2S1 579 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 METTL17Q9H7H0 456 aaPredicted RBP14.12□□□□□ -0.15
PTPRK-208ENST00000392449 SMURF2Q9HAU4 748 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 SLCO1C1Q9NYB5 712 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 NPIPB13A6NJU9 1138 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 NPIPB4C9JG80 1138 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 NME4O00746 187 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 SPRY3O43610 288 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 TCF21O43680 179 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 NGFP01138 241 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 IGHMP01871 453 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 DRD4P21917 467 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 GPR4P46093 362 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 LIPEQ05469 1076 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 SPRNQ5BIV9 151 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 OTPQ5XKR4 325 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 ZNF774Q6NX45 483 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 OFCC1Q8IZS5 231 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 SLC25A40Q8TBP6 338 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 MARS2Q96GW9 593 aaKnown RBP14.12□□□□□ -0.15
PTPRK-208ENST00000392449 FNDC11Q9BVV2 318 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 OR2H1Q9GZK4 316 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 OR2J1Q9GZK6 312 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 STX18Q9P2W9 335 aaKnown RBP14.12□□□□□ -0.15
PTPRK-208ENST00000392449 GPR160Q9UJ42 338 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 ADAM18Q9Y3Q7 739 aa14.12□□□□□ -0.15
PTPRK-208ENST00000392449 IGHV1-69-2A0A0G2JMI3 117 aa14.11□□□□□ -0.15
PTPRK-208ENST00000392449 ZSCAN5BA6NJL1 495 aa14.11□□□□□ -0.15
PTPRK-208ENST00000392449 CXCR6O00574 342 aa14.11□□□□□ -0.15
PTPRK-208ENST00000392449 CDC42EP2O14613 210 aa14.11□□□□□ -0.15
PTPRK-208ENST00000392449 IGHV1-46P01743 117 aa14.11□□□□□ -0.15
PTPRK-208ENST00000392449 IGHV3-13P01766 116 aa14.11□□□□□ -0.15
PTPRK-208ENST00000392449 TFP02787 698 aa14.11□□□□□ -0.15
PTPRK-208ENST00000392449 IFNW1P05000 195 aa14.11□□□□□ -0.15
PTPRK-208ENST00000392449 ZNF26P17031 533 aaPredicted RBP14.11□□□□□ -0.15
PTPRK-208ENST00000392449 GDI2P50395 445 aaKnown RBP14.11□□□□□ -0.15
PTPRK-208ENST00000392449 ZNF81P51508 661 aa14.11□□□□□ -0.15
PTPRK-208ENST00000392449 SLC7A2P52569 658 aa14.11□□□□□ -0.15
PTPRK-208ENST00000392449 ENDOGQ14249 297 aaKnown RBP14.11□□□□□ -0.15
PTPRK-208ENST00000392449 FAM27BQ5VT28 67 aa14.11□□□□□ -0.15
PTPRK-208ENST00000392449 UGT2A3Q6UWM9 527 aa14.11□□□□□ -0.15
PTPRK-208ENST00000392449 RFLNBQ8N5W9 214 aa14.11□□□□□ -0.15
PTPRK-208ENST00000392449 ABHD4Q8TB40 342 aa14.11□□□□□ -0.15
PTPRK-208ENST00000392449 ALG12Q9BV10 488 aa14.11□□□□□ -0.15
PTPRK-208ENST00000392449 EMC7Q9NPA0 242 aa14.11□□□□□ -0.15
PTPRK-208ENST00000392449 MRGBPQ9NV56 204 aa14.11□□□□□ -0.15
PTPRK-208ENST00000392449 A0A087WUU8 490 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 EFCAB9A8MZ26 197 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 PRSS23O95084 383 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 AVPP01185 164 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 NCK1P16333 377 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 CRYBB2P43320 205 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 MMP15P51511 669 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 PRKCDQ05655 676 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 TRAM2Q15035 370 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 PCGF3Q3KNV8 242 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 LIPNQ5VXI9 398 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 FAHD2BQ6P2I3 314 aaPredicted RBP14.1□□□□□ -0.15
PTPRK-208ENST00000392449 C1orf229Q6ZS94 237 aaPredicted RBP14.1□□□□□ -0.15
PTPRK-208ENST00000392449 TSEN54Q7Z6J9 526 aaKnown RBP14.1□□□□□ -0.15
PTPRK-208ENST00000392449 OAFQ86UD1 273 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 OR51F2Q8NH61 342 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 KLF14Q8TD94 323 aaPredicted RBP14.1□□□□□ -0.15
PTPRK-208ENST00000392449 LZICQ8WZA0 190 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 FAHD2AQ96GK7 314 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 HSH2DQ96JZ2 352 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 RBP7Q96R05 134 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 POFUT1Q9H488 388 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 ZNF665Q9H7R5 613 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 SAP30LQ9HAJ7 183 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 DECR2Q9NUI1 292 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 NKIRAS2Q9NYR9 191 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 WIPI2Q9Y4P8 454 aa14.1□□□□□ -0.15
PTPRK-208ENST00000392449 VENTXO95231 258 aa14.09□□□□□ -0.15
PTPRK-208ENST00000392449 SERPINA1P01009 418 aa14.09□□□□□ -0.15
PTPRK-208ENST00000392449 COX4I1P13073 169 aa14.09□□□□□ -0.15
PTPRK-208ENST00000392449 GCH1P30793 250 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms