RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 LAP3P28838 519 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 EIF1P41567 113 aaKnown RBP0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 YAP1P46937 504 aaKnown RBP0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 GALR1P47211 349 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 RABIFP47224 123 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 IDH2P48735 452 aaKnown RBP0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 PPT1P50897 306 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 CRADDP78560 199 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 CBX1P83916 185 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 CDK16Q00536 496 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 KLRB1Q12918 225 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 ECH1Q13011 328 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 SELPLGQ14242 412 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 RBMY1FQ15415 496 aaKnown RBP0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 ZSCAN26Q16670 478 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 DGUOKQ16854 277 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 SP6Q3SY56 376 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 DEFB134Q4QY38 66 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 MPV17L2Q567V2 206 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 SFT2D3Q587I9 215 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 YIF1BQ5BJH7 314 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 TCEAL5Q5H9L2 206 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 FAM222AQ5U5X8 452 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 CEMP1Q6PRD7 247 aaPredicted RBP0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 SGPP2Q8IWX5 399 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 PIANPQ8IYJ0 282 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 METTL13Q8N6R0 699 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 FAM133AQ8N9E0 248 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 TRPV1Q8NER1 839 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 KLF14Q8TD94 323 aaPredicted RBP0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 C17orf50Q8WW18 174 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 TCEAL3Q969E4 200 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 TMEM54Q969K7 222 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 PTX4Q96A99 478 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 SEH1LQ96EE3 360 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 C4orf36Q96KX1 117 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 SENP8Q96LD8 212 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 ZNF488Q96MN9 340 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 SECISBP2Q96T21 854 aaKnown RBP0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 RARRES2Q99969 163 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 LZTS2Q9BRK4 669 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 TPPP3Q9BW30 176 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 HSD3B7Q9H2F3 369 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 MEAF6Q9HAF1 191 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 POLE3Q9NRF9 147 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 UFSP2Q9NUQ7 469 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 RHBDL2Q9NX52 303 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 NINJ2Q9NZG7 142 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 PIPOXQ9P0Z9 390 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 MRPS18BQ9Y676 258 aaKnown RBP0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 DDX49Q9Y6V7 483 aaKnown RBP0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 LTBP4Q8N2S1 1624 aa0.49□□□□□ -2.33
SNORD28B-201ENST00000390993 CDHR2Q9BYE9 1310 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 ZNF726A6NNF4 738 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 D6RAR5 112 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 NVLO15381 856 aaKnown RBP0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 PRKAB2O43741 272 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 LANCL1O43813 399 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 PRPSAP2O60256 369 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 TBX19O60806 448 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 RAMP3O60896 148 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 SLC22A5O76082 557 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 UTS2O95399 124 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 CLDN9O95484 217 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 PTBP3O95758 552 aaKnown RBP0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 AIFM1O95831 613 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 PAHP00439 452 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 AK1P00568 194 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 IGHV2-5P01817 119 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 IGKV1-16P04430 117 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 UQCRFS1P1P0C7P4 283 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 EPB41P11171 864 aaKnown RBP0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 TCP1P17987 556 aaKnown RBP0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 DRD5P21918 477 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 CD1CP29017 333 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 MAS1LP35410 378 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 OPRD1P41143 372 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 HCAR3P49019 387 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 CAMLGP49069 296 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 P2RX1P51575 399 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 YBEYP58557 167 aaPredicted RBP0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 TAS2R31P59538 309 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 NUTF2P61970 127 aaKnown RBP0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 CDH17Q12864 832 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 C1orf61Q13536 156 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 MAD2L1BPQ15013 274 aaPredicted RBP0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 PON2Q15165 354 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 QPRTQ15274 297 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 KRTAP6-3Q3LI67 103 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 SLC36A3Q495N2 470 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 PTPN20Q4JDL3 420 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 PHYHD1Q5SRE7 291 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 H3F3CQ6NXT2 135 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 SPNS3Q6ZMD2 512 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 SLC16A13Q7RTY0 426 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 ADM2Q7Z4H4 148 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 PUSL1Q8N0Z8 303 aaKnown RBP0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 GTPBP8Q8N3Z3 284 aaPredicted RBP0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 SPANXA2-OT1Q8N9U9 137 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 TTLQ8NG68 377 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms