RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 SLC10A3P09131 477 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 IRS1P35568 1242 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 RPS25P62851 125 aaKnown RBP11.43□□□□□ -0.58
CHD3-203ENST00000380358 HENMT1Q5T8I9 393 aaKnown RBP11.43□□□□□ -0.58
CHD3-203ENST00000380358 VWA1Q6PCB0 445 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 TSEN54Q7Z6J9 526 aaKnown RBP11.43□□□□□ -0.58
CHD3-203ENST00000380358 ZNF595Q8IYB9 648 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 UMODL1-AS1Q8N2C9 162 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 OR1L4Q8NGR5 311 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 OR51F2Q8NH61 342 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 RTL8AQ9BWD3 113 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 OR5K3A6NET4 321 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 OPRM1P35372 400 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 KRTDAPP60985 99 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 IL10RAQ13651 578 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 GALNT16Q8N428 558 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 KHSRPQ92945 711 aaKnown RBP eCLIP11.42□□□□□ -0.58
CHD3-203ENST00000380358 C14orf79Q96F83 325 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 A0A087WZY1 265 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 SH2D1BO14796 132 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 IMPA1P29218 277 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 TPPP2P59282 170 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 SMN1Q16637 294 aaKnown RBP11.42□□□□□ -0.58
CHD3-203ENST00000380358 SOWAHCQ53LP3 525 aaPredicted RBP11.42□□□□□ -0.58
CHD3-203ENST00000380358 PM20D1Q6GTS8 502 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 OR2M3Q8NG83 312 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 ZNF480Q8WV37 535 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 SLC7A6Q92536 515 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 RABL2BQ9UNT1 228 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 COQ4Q9Y3A0 265 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 FITM1A5D6W6 292 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 SDCBPO00560 298 aaPredicted RBP11.42□□□□□ -0.58
CHD3-203ENST00000380358 C1SP09871 688 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 MMP12P39900 470 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 FBXL14Q8N1E6 418 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 MRPL43Q8N983 215 aaKnown RBP11.42□□□□□ -0.58
CHD3-203ENST00000380358 GDPD1Q8N9F7 314 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 TMEM163Q8TC26 289 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 CDCA3Q99618 268 aaPredicted RBP11.42□□□□□ -0.58
CHD3-203ENST00000380358 PSD2Q9BQI7 771 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 NIPSNAP3BQ9BS92 247 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 PLA2G3Q9NZ20 509 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 USP22Q9UPT9 525 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 A0A1B0GTW7 788 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 YKT6O15498 198 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 DNAJB6O75190 326 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 SBK2P0C263 348 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 WDTC1Q8N5D0 677 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 ASB17Q8WXJ9 295 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 PLEKHF2Q9H8W4 249 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 SERINC4A6NH21 518 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 HCRTR1O43613 425 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 UPK1BO75841 260 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 OR2J2O76002 312 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 LILRB1Q8NHL6 650 aaPredicted RBP11.42□□□□□ -0.58
CHD3-203ENST00000380358 AKIRIN1Q9H9L7 192 aaPredicted RBP11.42□□□□□ -0.58
CHD3-203ENST00000380358 FABP1P07148 127 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 OR10A3P58181 314 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 RPS27AP62979 156 aaKnown RBP11.42□□□□□ -0.58
CHD3-203ENST00000380358 UBA52P62987 128 aaKnown RBP11.42□□□□□ -0.58
CHD3-203ENST00000380358 BTNL8Q6UX41 500 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 ADGRG3Q86Y34 549 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 NAXDQ8IW45 347 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 NXPE3Q969Y0 559 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 C12orf42Q96LP6 360 aa11.42□□□□□ -0.58
CHD3-203ENST00000380358 ZNF300Q96RE9 604 aaPredicted RBP11.42□□□□□ -0.58
CHD3-203ENST00000380358 TMEM221A6NGB7 291 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 PI3P19957 117 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 CD68P34810 354 aaPredicted RBP11.41□□□□□ -0.58
CHD3-203ENST00000380358 SLC6A12P48065 614 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 RAB38P57729 211 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 SOHLH1Q5JUK2 328 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 RTL6Q6ICC9 239 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 DPPA4Q7L190 304 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 PTRH1Q86Y79 214 aaKnown RBP11.41□□□□□ -0.58
CHD3-203ENST00000380358 SEMA6DQ8NFY4 1073 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 OR2Z1Q8NG97 314 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 ZNF420Q8TAQ5 688 aaPredicted RBP11.41□□□□□ -0.58
CHD3-203ENST00000380358 KIRREL1Q96J84 757 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 SLC22A7Q9Y694 548 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 ZNF83P51522 516 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 INSM1Q01101 510 aaPredicted RBP11.41□□□□□ -0.58
CHD3-203ENST00000380358 SPEM2Q0P670 501 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 KDM4DQ6B0I6 523 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 CCL17Q92583 94 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 NUDT9Q9BW91 350 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 IL37Q9NZH6 218 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 UFC1Q9Y3C8 167 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 HAX1O00165 279 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 CRYAAP02489 173 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 USF1P22415 310 aaPredicted RBP11.41□□□□□ -0.58
CHD3-203ENST00000380358 ZMAT1Q5H9K5 638 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 CLVS2Q5SYC1 327 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 ANKLE1Q8NAG6 615 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 CORO2AQ92828 525 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 COMMD5Q9GZQ3 224 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 TNFRSF17Q02223 184 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 NFATC3Q12968 1075 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 GTF2H5Q6ZYL4 71 aa11.41□□□□□ -0.58
CHD3-203ENST00000380358 ARHGEF39Q8N4T4 335 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms