RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 MDGA2Q7Z553 956 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 FAM219AQ8IW50 185 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF784Q8NCA9 323 aaPredicted RBP11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 OR2AK2Q8NG84 335 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 SLC37A2Q8TED4 501 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 KLHL9Q9P2J3 617 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 SLC22A13Q9Y226 551 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 SLCO1B1Q9Y6L6 691 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 C2orf72A6NCS6 295 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 TGFBR3LH3BV60 316 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 EIF4E2O60573 245 aaKnown RBP11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 CTNSO60931 367 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 OR2T7P0C7T2 308 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 GTF2F2P13984 249 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 FCARP24071 287 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 P2RX1P51575 399 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 ACTC1P68032 377 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 ACTA1P68133 377 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 MEP1BQ16820 701 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 NKPD1Q17RQ9 610 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 PLEKHN1Q494U1 663 aaPredicted RBP11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 ARMC6Q6NXE6 501 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 SHISA6Q6ZSJ9 500 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 FAM122BQ7Z309 247 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 FAM220AQ7Z4H9 259 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 OOSP2Q86WS3 158 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 WDSUB1Q8N9V3 476 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 OR13H1Q8NG92 308 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 OR2T27Q8NH04 317 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 PAQR8Q8TEZ7 354 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 SLC22A18Q96BI1 424 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF764Q96H86 408 aaPredicted RBP11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 DUSP22Q9NRW4 184 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 FBXL3Q9UKT7 428 aa11.3□□□□□ -0.6
PRPF40B-202ENST00000380281 TMEM82A0PJX8 343 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 DCDC2BA2VCK2 349 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 K7EQS6 105 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 CLN5O75503 358 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 FBP1P09467 338 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 CTSEP14091 401 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF44P15621 663 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 NQO2P16083 231 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 ADRA2CP18825 462 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 GRK6P43250 576 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 GPR143P51810 404 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 DCDP81605 110 aaKnown RBP11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 DEFA6Q01524 100 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 ALG11Q2TAA5 492 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 SCGB2B2Q4G0G5 96 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 KLHL26Q53HC5 615 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 RPL22L1Q6P5R6 122 aaKnown RBP11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 UNQ6126/PRO20091Q6UXV3 157 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 CA13Q8N1Q1 262 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 NPEPL1Q8NDH3 523 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 OR5AK2Q8NH90 309 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 ANKRD9Q96BM1 317 aaPredicted RBP11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 RBM14Q96PK6 669 aaKnown RBP11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 ADOQ96SZ5 270 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 AMELYQ99218 206 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 ANKRD10Q9NXR5 420 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 LAMP5Q9UJQ1 280 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 CARNS1A5YM72 827 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 M0QYG6 137 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 FADS1O60427 444 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 SC5DO75845 299 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 WISP1O95388 367 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 OPN1LWP04000 364 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 UBBP0CG47 229 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 UBCP0CG48 685 aaKnown RBP11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 MGMTP16455 207 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 NTSR1P30989 418 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 RPS27AP62979 156 aaKnown RBP11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 UBA52P62987 128 aaKnown RBP11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 BDH1Q02338 343 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 FHL5Q5TD97 284 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 ULK3Q6PHR2 472 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 NPSR1Q6W5P4 371 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 STAC2Q6ZMT1 411 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 DUSP19Q8WTR2 217 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF524Q96C55 264 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 TRIM2Q9C040 744 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 FAM117AQ9C073 453 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 SOHLH2Q9NX45 425 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 ABRACLQ9P1F3 81 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 CHRNA9Q9UGM1 479 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 FAM96BQ9Y3D0 163 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 HEBP2Q9Y5Z4 205 aa11.29□□□□□ -0.6
PRPF40B-202ENST00000380281 PCNX3Q9H6A9 2034 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 C1orf196B1AJZ1 125 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 SOX1O00570 391 aaPredicted RBP11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 EIF1AYO14602 144 aaKnown RBP11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 GSTZ1O43708 216 aaPredicted RBP11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 EIF1AXP47813 144 aaKnown RBP11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 DIO1P49895 249 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 P2RY4P51582 365 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 PEA15Q15121 130 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 CD226Q15762 336 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 UBE2NLQ5JXB2 153 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 TMEM205Q6UW68 189 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 ARMC10Q8N2F6 343 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms