RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 ADGRE4PQ86SQ3 457 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 ADIPOR2Q86V24 386 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 NKAIN4Q8IVV8 208 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 DEFB108BQ8NET1 73 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 MYH14Q7Z406 1995 aaKnown RBP11□□□□□ -0.65
PCDHA9-201ENST00000378122 PRSS44E7EML9 344 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 PDZK1IP1Q13113 114 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 MARCH3Q86UD3 253 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 UBTD1Q9HAC8 227 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 AKIP1Q9NQ31 210 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 MRPL22Q9NWU5 206 aaKnown RBP11□□□□□ -0.65
PCDHA9-201ENST00000378122 PCDHGA5Q9Y5G8 931 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 D6RAR5 112 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 ADAM10O14672 748 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 PIPP12273 146 aaPredicted RBP11□□□□□ -0.65
PCDHA9-201ENST00000378122 HOXA9P31269 272 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 HOXC13P31276 330 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 TSFMP43897 325 aaKnown RBP11□□□□□ -0.65
PCDHA9-201ENST00000378122 DGCR2P98153 550 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 CDC20Q12834 499 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 SLC16A14Q7RTX9 510 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 OR5L1Q8NGL2 311 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 ACER3Q9NUN7 267 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 ASIC5Q9NY37 505 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 FBXL4Q9UKA2 621 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 CRYM-AS1A6NIL9 109 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 RAF1P04049 648 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 GIPP09681 153 aaPredicted RBP11□□□□□ -0.65
PCDHA9-201ENST00000378122 CPT2P23786 658 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 SLC48A1Q6P1K1 146 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 HIST2H3AQ71DI3 136 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 SLC22A24Q8N4F4 322 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 KCNRGQ8N5I3 272 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 NXT1Q9UKK6 140 aaKnown RBP11□□□□□ -0.65
PCDHA9-201ENST00000378122 SLCO2B1O94956 709 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 ITGBL1O95965 494 aaPredicted RBP11□□□□□ -0.65
PCDHA9-201ENST00000378122 HBE1P02100 147 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 PCBD1P61457 104 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 MEP1BQ16820 701 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 AARDQ4LEZ3 155 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 YOD1Q5VVQ6 348 aaPredicted RBP11□□□□□ -0.65
PCDHA9-201ENST00000378122 TMEM179BQ7Z7N9 219 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 OR14A16Q8NHC5 309 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 HRASLSQ9HDD0 168 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 TNFRSF12AQ9NP84 129 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 OR7C1O76099 320 aaPredicted RBP11□□□□□ -0.65
PCDHA9-201ENST00000378122 SCAF4O95104 1147 aaKnown RBP11□□□□□ -0.65
PCDHA9-201ENST00000378122 IL2RAP01589 272 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 GPX2P18283 190 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 FLI1Q01543 452 aaPredicted RBP11□□□□□ -0.65
PCDHA9-201ENST00000378122 H3F3CQ6NXT2 135 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 SUMF1Q8NBK3 374 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 OR1S2Q8NGQ3 325 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 TMEM231Q9H6L2 316 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 ERVMER34-1Q9H9K5 563 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 RAB9BQ9NP90 201 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 OR52A1Q9UKL2 312 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 CSAG2Q9Y5P2 127 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 ZNF749O43361 778 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 NPPBP16860 134 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 MRPL19P49406 292 aaKnown RBP10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 DCAF7P61962 342 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 PHLDA2Q53GA4 152 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 SOHLH1Q5JUK2 328 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 SPNS3Q6ZMD2 512 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 WFDC5Q8TCV5 224 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 GABARAPL3Q9BY60 117 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 ANKRD61A6NGH8 418 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 GLCEO94923 617 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 CD27P26842 260 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 HSD17B7P56937 341 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 ADIRFQ15847 76 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 OR52I2Q8NH67 350 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 PIGTQ969N2 578 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 GHRLQ9UBU3 117 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 NDRG4Q9ULP0 352 aaKnown RBP10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 CACNA1SQ13698 1873 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 RNF212BA8MTL3 300 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 HMGN4O00479 90 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 PLPP1O14494 284 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 GSTP1P09211 210 aaKnown RBP10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 IL2RGP31785 369 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 CYB561P49447 251 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 CAMK2BQ13554 666 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 KIAA0141Q14154 515 aaPredicted RBP10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 TESK1Q15569 626 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 MSMO1Q15800 293 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 AANATQ16613 207 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 TMEM182Q6ZP80 229 aaPredicted RBP10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 OVCH1Q7RTY7 1134 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 DCXRQ7Z4W1 244 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 DAZAP1Q96EP5 407 aaKnown RBP10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 RNF170Q96K19 258 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 C10orf90Q96M02 699 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 PIGMQ9H3S5 423 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 TAS2R4Q9NYW5 299 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 SLC25A37Q9NYZ2 338 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 FLVCR2Q9UPI3 526 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 GAB2Q9UQC2 676 aa10.99□□□□□ -0.65
PCDHA9-201ENST00000378122 GPR55Q9Y2T6 319 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms