RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ZNF136P52737 540 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 ZBTB8AQ96BR9 441 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 EXOSC3Q9NQT5 275 aaKnown RBP13.12□□□□□ -0.31
TCOF1-202ENST00000377797 SH3BGRL2Q9UJC5 107 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 MSR1P21757 451 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 PCMT1P22061 227 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 LAP3P28838 519 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 SLC36A2Q495M3 483 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 AGAP7PQ5VUJ5 663 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 IL17RDQ8NFM7 739 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 AGAP4Q96P64 663 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 DEFB127Q9H1M4 99 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 TMEM74BQ9NUR3 256 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 SLC22A13Q9Y226 551 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 NUBP2Q9Y5Y2 271 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 OR2AT4A6NND4 320 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 TP53P04637 393 aaPredicted RBP13.12□□□□□ -0.31
TCOF1-202ENST00000377797 AKAIN1P0CW23 69 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 FUT5Q11128 374 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 AGAP6Q5VW22 663 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 PLCXD3Q63HM9 321 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 ST6GALNAC5Q9BVH7 336 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 SLCO1B1Q9Y6L6 691 aa13.12□□□□□ -0.31
TCOF1-202ENST00000377797 OR14I1A6ND48 311 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 ANKRD30BLA7E2S9 258 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 SULT1C4O75897 302 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 IGLV3-19P01714 112 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 GABRR1P24046 479 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 GDNFP39905 211 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 TATDN3Q17R31 274 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 DNAAF1Q8NEP3 725 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 HSD17B8Q92506 261 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 CLCC1Q96S66 551 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 C7orf50Q9BRJ6 194 aaKnown RBP13.11□□□□□ -0.31
TCOF1-202ENST00000377797 RAB33BQ9H082 229 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 CACNA1HO95180 2353 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 LOC107986453A0A1B0GWG9 222 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 KANTRA0A1W2PQU2 76 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 IMPA2O14732 288 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 ZNF254O75437 659 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 MTCP1P56278 107 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 CXADRP78310 365 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 C1QL3Q5VWW1 255 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 MOB3CQ70IA8 216 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 DEFB124Q8NES8 71 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 FAM3DQ96BQ1 224 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 SIGLEC11Q96RL6 698 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 RBFOX1Q9NWB1 397 aaKnown RBP13.11□□□□□ -0.31
TCOF1-202ENST00000377797 CGGBP1Q9UFW8 167 aaPredicted RBP13.11□□□□□ -0.31
TCOF1-202ENST00000377797 ABHD16AO95870 558 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 DBHP09172 617 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 APEHP13798 732 aaKnown RBP13.11□□□□□ -0.31
TCOF1-202ENST00000377797 DSCR4P56555 118 aaPredicted RBP13.11□□□□□ -0.31
TCOF1-202ENST00000377797 EGR3Q06889 387 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 SLC10A1Q14973 349 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 ACER2Q5QJU3 275 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 ARSKQ6UWY0 536 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 BOLLQ8N9W6 283 aaKnown RBP13.11□□□□□ -0.31
TCOF1-202ENST00000377797 CCDC120Q96HB5 630 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 RASL10BQ96S79 203 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 SLC5A6Q9Y289 635 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.11□□□□□ -0.31
TCOF1-202ENST00000377797 BEST4Q8NFU0 473 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 OR2G2Q8NGZ5 317 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 APH1AQ96BI3 265 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 TMEM246Q9BRR3 403 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 ABHD6Q9BV23 337 aa13.11□□□□□ -0.31
TCOF1-202ENST00000377797 PAPOLGQ9BWT3 736 aaKnown RBP13.11□□□□□ -0.31
TCOF1-202ENST00000377797 A0A0G2JMP0 313 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 RAF1P04049 648 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 FCGR2AP12318 317 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 ZNF16P17020 682 aaPredicted RBP13.1□□□□□ -0.31
TCOF1-202ENST00000377797 CSF2RBP32927 897 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 ATP1B3P54709 279 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 SLC17A1Q14916 467 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 APOOLQ6UXV4 268 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 CCDC71Q8IV32 467 aaPredicted RBP13.1□□□□□ -0.31
TCOF1-202ENST00000377797 OR4M2Q8NGB6 313 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 OR52N5Q8NH56 324 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 ORAI1Q96D31 301 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 WFDC6Q9BQY6 131 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 C12orf49Q9H741 205 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 UGT2A1Q9Y4X1 527 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 PLXNA3P51805 1871 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 SGCEO43556 437 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 IFNA7P01567 189 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 PNLIPP16233 465 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 ZNF93P35789 620 aaPredicted RBP13.1□□□□□ -0.31
TCOF1-202ENST00000377797 CDKN2AP42771 156 aaKnown RBP13.1□□□□□ -0.31
TCOF1-202ENST00000377797 OR10A3P58181 314 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 GRB2P62993 217 aaKnown RBP13.1□□□□□ -0.31
TCOF1-202ENST00000377797 HACD4Q5VWC8 232 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 C9orf40Q8IXQ3 194 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 OR6M1Q8NGM8 313 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 OR2T35Q8NGX2 323 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 MAN2C1Q9NTJ4 1040 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 SLCO1C1Q9NYB5 712 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 HIF3AQ9Y2N7 669 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 SDK2Q58EX2 2172 aa13.1□□□□□ -0.31
TCOF1-202ENST00000377797 ZNF814B7Z6K7 855 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms