RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 MSR1P21757 451 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 USF1P22415 310 aaPredicted RBP14.47□□□□□ -0.09
HMGN4-201ENST00000377575 CALB2P22676 271 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 APEX1P27695 318 aaKnown RBP14.47□□□□□ -0.09
HMGN4-201ENST00000377575 SDHAP31040 664 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 IFNGR2P38484 337 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 RAD52P43351 418 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 LCN6P62502 163 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 KRR1Q13601 381 aaKnown RBP14.47□□□□□ -0.09
HMGN4-201ENST00000377575 MSMPQ1L6U9 139 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 TMEM249Q2WGJ8 235 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 MESTQ5EB52 335 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 MTX3Q5HYI7 312 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 FOXL2NBQ6ZUU3 175 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 FAM122BQ7Z309 247 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 PAQR4Q8N4S7 273 aaPredicted RBP14.47□□□□□ -0.09
HMGN4-201ENST00000377575 ZNF540Q8NDQ6 660 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 FANK1Q8TC84 345 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 NSL1Q96IY1 281 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 Q96M85 177 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 FUZQ9BT04 418 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 MUC13Q9H3R2 512 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 MS4A5Q9H3V2 200 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 IL1RAPQ9NPH3 570 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 REV1Q9UBZ9 1251 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 FZR1Q9UM11 496 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 TEX13CA0A0J9YWL9 993 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 PRSS37A4D1T9 235 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 B2RBV5 119 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 VWC2LB2RUY7 222 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 PTP4A3O75365 173 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 LCKP06239 509 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 DAOP14920 347 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 STOMP27105 288 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 LAP3P28838 519 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 NR4A2P43354 598 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 RPS6KA3P51812 740 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 IQCCQ4KMZ1 466 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 UNQ6126/PRO20091Q6UXV3 157 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 DPY19L2P2Q6ZN68 376 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 ADCK1Q86TW2 530 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 ZDHHC21Q8IVQ6 265 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 ALDH16A1Q8IZ83 802 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 ZCCHC24Q8N2G6 241 aaKnown RBP14.46□□□□□ -0.09
HMGN4-201ENST00000377575 RASD2Q96D21 266 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 WACQ9BTA9 647 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 OR51B6Q9H340 312 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 TPK1Q9H3S4 243 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 NRIP3Q9NQ35 241 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 ACTR3BQ9P1U1 418 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 DUSP13Q9UII6 198 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 GPR160Q9UJ42 338 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 TMCC3Q9ULS5 477 aa14.46□□□□□ -0.09
HMGN4-201ENST00000377575 RTTNQ86VV8 2226 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 C12orf71A8MTZ7 269 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 OR10H3O60404 316 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 CCNOP22674 350 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 RRM2P31350 389 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 ALDH3B1P43353 468 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 GDI2P50395 445 aaKnown RBP14.45□□□□□ -0.1
HMGN4-201ENST00000377575 UCP2P55851 309 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 KLF3P57682 345 aaPredicted RBP14.45□□□□□ -0.1
HMGN4-201ENST00000377575 PSG4Q00888 419 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 GGTLC2Q14390 218 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 NKPD1Q17RQ9 610 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 SMARCD3Q6STE5 483 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 SYT9Q86SS6 491 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 ICA1LQ8NDH6 482 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 CPEB3Q8NE35 698 aaKnown RBP14.45□□□□□ -0.1
HMGN4-201ENST00000377575 AKR7LQ8NHP1 331 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 SYNPRQ8TBG9 265 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 SNX33Q8WV41 574 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 C11orf40Q8WZ69 217 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 OR2H1Q9GZK4 316 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 POLE4Q9NR33 117 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 YAE1D1Q9NRH1 226 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 EIF3KQ9UBQ5 218 aaKnown RBP14.45□□□□□ -0.1
HMGN4-201ENST00000377575 ADAM21Q9UKJ8 722 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 TIMM10BQ9Y5J6 103 aa14.45□□□□□ -0.1
HMGN4-201ENST00000377575 SONP18583 2426 aaKnown RBP14.45□□□□□ -0.1
HMGN4-201ENST00000377575 C5orf49A4QMS7 147 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 SOCS2O14508 198 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 STAMBPO95630 424 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 ZNF250P15622 560 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 ATP6V1B2P21281 511 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 FPR3P25089 353 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 C6orf52Q5T4I8 152 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 CYP2R1Q6VVX0 501 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 THSD4Q6ZMP0 1018 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 LRP11Q86VZ4 500 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 ZNF786Q8N393 782 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 UBASH3BQ8TF42 649 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 POM121L2Q96KW2 1035 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 FOXN4Q96NZ1 517 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 ZNF416Q9BWM5 594 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 BPESC1Q9GZL8 116 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 WNT5BQ9H1J7 359 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 SYT4Q9H2B2 425 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 SLCO1C1Q9NYB5 712 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 VSX1Q9NZR4 365 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms