RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 FOSL2P15408 326 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 HLXQ14774 488 aaPredicted RBP12.6□□□□□ -0.39
MSH5-202ENST00000375740 PWWP2BQ6NUJ5 590 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 CDC20BQ86Y33 519 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 PM20D2Q8IYS1 436 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 APCDD1LQ8NCL9 501 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 NFAM1Q8NET5 270 aaPredicted RBP12.6□□□□□ -0.39
MSH5-202ENST00000375740 MRPS24Q96EL2 167 aaKnown RBP12.6□□□□□ -0.39
MSH5-202ENST00000375740 WDR76Q9H967 626 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 TAS2R10Q9NYW0 307 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 GLS2Q9UI32 602 aa12.6□□□□□ -0.39
MSH5-202ENST00000375740 A0A1B0GTQ1 180 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 SCRG1O75711 98 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 WDPCPO95876 746 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 SRMP19623 302 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 SQSTM1Q13501 440 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 EEF1A1P5Q5VTE0 462 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 SLC6A19Q695T7 634 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 ZNF454Q8N9F8 522 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 OR56B4Q8NH76 319 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 OR1S1Q8NH92 325 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 SAP25Q8TEE9 199 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 SEMA4CQ9C0C4 833 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 SLC6A15Q9H2J7 730 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 ESRP2Q9H6T0 727 aaKnown RBP12.59□□□□□ -0.39
MSH5-202ENST00000375740 ABRACLQ9P1F3 81 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 MGAT4CQ9UBM8 478 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 PFDN2Q9UHV9 154 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 IGHV5-10-1A0A0J9YXX1 117 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 ACOD1A6NK06 481 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 A8MVM7 634 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 NPIPB7O75200 414 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 UPK3AO75631 287 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 AKR7A3O95154 331 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 LDOC1O95751 146 aaPredicted RBP12.59□□□□□ -0.39
MSH5-202ENST00000375740 NFYAP23511 347 aaPredicted RBP12.59□□□□□ -0.39
MSH5-202ENST00000375740 RPS27P42677 84 aaKnown RBP12.59□□□□□ -0.39
MSH5-202ENST00000375740 RAD52P43351 418 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 FBXW4P57775 412 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 OC90Q02509 493 aaPredicted RBP12.59□□□□□ -0.39
MSH5-202ENST00000375740 C1orf140Q5VVS0 124 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 LIPNQ5VXI9 398 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 GRINAQ7Z429 371 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 OR6N2Q8NGY6 317 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 RGP1Q92546 391 aaPredicted RBP12.59□□□□□ -0.39
MSH5-202ENST00000375740 MFRPQ9BY79 579 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 OR11A1Q9GZK7 315 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 FANCFQ9NPI8 374 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 PRDM6Q9NQX0 595 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 COPZ2Q9P299 210 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 CYB5R1Q9UHQ9 305 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 LAMP5Q9UJQ1 280 aa12.59□□□□□ -0.39
MSH5-202ENST00000375740 SPEGQ15772 3267 aa12.58□□□□□ -0.39
MSH5-202ENST00000375740 ZNF879B4DU55 563 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 AIPO00170 330 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 ALOX12BO75342 701 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 PEX14O75381 377 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 MT-ATP6P00846 226 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 DEFA5Q01523 94 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 KLF9Q13886 244 aaPredicted RBP12.58□□□□□ -0.4
MSH5-202ENST00000375740 SGCBQ16585 318 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 HLA-BQ31612 363 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 FAM69AQ5T7M9 428 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 FAM220AQ7Z4H9 259 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 METTL21AQ8WXB1 218 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 NPDC1Q9NQX5 325 aaPredicted RBP12.58□□□□□ -0.4
MSH5-202ENST00000375740 RARRES3Q9UL19 164 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 MYO15AQ9UKN7 3530 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 PI4KAP42356 2102 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 CACNA1EQ15878 2313 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 ARPC5O15511 151 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 ADRB1P08588 477 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 ACKR1Q16570 336 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 OTPQ5XKR4 325 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 FAAP20Q6NZ36 180 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 DPY19L4Q7Z388 723 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 RELL2Q8NC24 303 aaPredicted RBP12.58□□□□□ -0.4
MSH5-202ENST00000375740 THEM6Q8WUY1 208 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 PHYHIPQ92561 330 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 GFI1Q99684 422 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 SLC25A18Q9H1K4 315 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 TSPAN10Q9H1Z9 355 aaPredicted RBP12.58□□□□□ -0.4
MSH5-202ENST00000375740 MED9Q9NWA0 146 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 FRRS1LQ9P0K9 344 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 IKZF2Q9UKS7 526 aa12.58□□□□□ -0.4
MSH5-202ENST00000375740 A0A1B0GTH9 108 aa12.57□□□□□ -0.4
MSH5-202ENST00000375740 XKRYO14609 159 aa12.57□□□□□ -0.4
MSH5-202ENST00000375740 ABHD16AO95870 558 aa12.57□□□□□ -0.4
MSH5-202ENST00000375740 ALOX5APP20292 161 aa12.57□□□□□ -0.4
MSH5-202ENST00000375740 DCDP81605 110 aaKnown RBP12.57□□□□□ -0.4
MSH5-202ENST00000375740 ALKBH1Q13686 389 aaKnown RBP12.57□□□□□ -0.4
MSH5-202ENST00000375740 UBALD2Q8IYN6 164 aa12.57□□□□□ -0.4
MSH5-202ENST00000375740 OR8K3Q8NH51 312 aa12.57□□□□□ -0.4
MSH5-202ENST00000375740 LRRC46Q96FV0 321 aa12.57□□□□□ -0.4
MSH5-202ENST00000375740 INTS14Q96SY0 518 aa12.57□□□□□ -0.4
MSH5-202ENST00000375740 PILRBQ9UKJ0 227 aa12.57□□□□□ -0.4
MSH5-202ENST00000375740 ALPK2Q86TB3 2170 aa12.57□□□□□ -0.4
MSH5-202ENST00000375740 ARPC1BO15143 372 aaKnown RBP12.57□□□□□ -0.4
MSH5-202ENST00000375740 DXOO77932 396 aaKnown RBP12.57□□□□□ -0.4
MSH5-202ENST00000375740 EMP2P54851 167 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms