RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 A0A0G2JMP0 313 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 ZNF814B7Z6K7 855 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 ZNF74Q16587 644 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 OR4M2Q8NGB6 313 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 DVL3Q92997 716 aaPredicted RBP16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 TAAR8Q969N4 342 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 MMP25Q9NPA2 562 aa16.29■□□□□ 0.2
PTPDC1-202ENST00000375360 TRAPPC2LH3BP13 241 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 TFP02787 698 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 OR10A3P58181 314 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 EBPQ15125 230 aaKnown RBP16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 MEX3BQ6ZN04 569 aaKnown RBP16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 TEX19Q8NA77 164 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 NIPAL2Q9H841 368 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 LOC107986453A0A1B0GWG9 222 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 FFAR1O14842 300 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 WNT1P04628 370 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 METAP1DQ6UB28 335 aaPredicted RBP16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 ANKRD37Q7Z713 158 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 ARL5BQ96KC2 179 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 TREM1Q9NP99 234 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 MAP2K6P52564 334 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 PSPHP78330 225 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 MRPS10P82664 201 aaKnown RBP16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 C1QL3Q5VWW1 255 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 CELF2-AS1Q8N7Q2 184 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 OR6F1Q8NGZ6 308 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 SIGLEC11Q96RL6 698 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 BANF2Q9H503 90 aa16.28■□□□□ 0.2
PTPDC1-202ENST00000375360 A0A0A6YYH2 397 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 A6NJ64 397 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 CALCBP10092 127 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 IL13RA1P78552 427 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 PLEKHN1Q494U1 663 aaPredicted RBP16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 C8orf82Q6P1X6 216 aaPredicted RBP16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 GSG1LQ6UXU4 331 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 LIPHQ8WWY8 451 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 ALKBH3Q96Q83 286 aaPredicted RBP16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 CMSS1Q9BQ75 279 aaKnown RBP16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 LANCL2Q9NS86 450 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 SPEF1Q9Y4P9 236 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 ARHGEF17Q96PE2 2063 aaPredicted RBP16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 STMND1H3BQB6 276 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 TNFSF14O43557 240 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 FOXS1O43638 330 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 UBCP0CG48 685 aaKnown RBP16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 CDAP32320 146 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 HMGA2P52926 109 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 AIMP2Q13155 320 aaKnown RBP16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 GNMTQ14749 295 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 CD226Q15762 336 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 ZNF684Q5T5D7 378 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 TMPRSS11FQ6ZWK6 438 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 SYT3Q9BQG1 590 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 DUSP15Q9H1R2 295 aaPredicted RBP16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 MAB21L2Q9Y586 359 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 RLFQ13129 1914 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 CBR3O75828 277 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 GPANK1O95872 356 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 MSR1P21757 451 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 LAP3P28838 519 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 C21orf58P58505 322 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 METTL11BQ5VVY1 283 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 RAB3CQ96E17 227 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 RRNAD1Q96FB5 475 aaKnown RBP16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 EHFQ9NZC4 300 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 KCNN3Q9UGI6 736 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 NUP50Q9UKX7 468 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 KLF13Q9Y2Y9 288 aaPredicted RBP16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 NUBP2Q9Y5Y2 271 aa16.27■□□□□ 0.2
PTPDC1-202ENST00000375360 SCN5AQ14524 2016 aa16.27■□□□□ 0.19
PTPDC1-202ENST00000375360 RP2O75695 350 aa16.27■□□□□ 0.19
PTPDC1-202ENST00000375360 PRSS23O95084 383 aa16.27■□□□□ 0.19
PTPDC1-202ENST00000375360 TOMM34Q15785 309 aaPredicted RBP16.27■□□□□ 0.19
PTPDC1-202ENST00000375360 SLC25A46Q96AG3 418 aa16.27■□□□□ 0.19
PTPDC1-202ENST00000375360 ZNF681Q96N22 645 aa16.27■□□□□ 0.19
PTPDC1-202ENST00000375360 C11orf54Q9H0W9 315 aaPredicted RBP16.27■□□□□ 0.19
PTPDC1-202ENST00000375360 B9D1Q9UPM9 204 aa16.27■□□□□ 0.19
PTPDC1-202ENST00000375360 MED12Q93074 2177 aa16.27■□□□□ 0.19
PTPDC1-202ENST00000375360 SBF1O95248 1867 aa16.27■□□□□ 0.19
PTPDC1-202ENST00000375360 B4DXG7 233 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 CX3CR1P49238 355 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 EFNA3P52797 238 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 MYBPHQ13203 477 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 TNK1Q13470 666 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 AGAP6Q5VW22 663 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 OR10K2Q6IF99 312 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 LRRC20Q8TCA0 184 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 METTL9Q9H1A3 318 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 FAM86C1Q9NVL1 165 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 NDUFB11Q9NX14 153 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 RRP8O43159 456 aaKnown RBP16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 CPEP16870 476 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 UBE2NLQ5JXB2 153 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 B3GNTL1Q67FW5 361 aaPredicted RBP16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 Q6ZTK2 550 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 PGAP1Q75T13 922 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 ZNF679Q8IYX0 411 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 MOGAT1Q96PD6 335 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 TAS2R4Q9NYW5 299 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms