RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 MLC1Q15049 377 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 EMC4Q5J8M3 183 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 ZFPM2Q8WW38 1151 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 SLC6A18Q96N87 628 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 PTDSS2Q9BVG9 487 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 ZNF629Q9UEG4 869 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-203ENST00000375274 ZNF223Q9UK11 482 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-203ENST00000375274 DLEC1Q9Y238 1755 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 A0A0A6YYD5 115 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 CD1CP29017 333 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 RAB4BP61018 213 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 RPL18Q07020 188 aaKnown RBP10.54□□□□□ -0.72
PTCH1-203ENST00000375274 CD300LGQ6UXG3 332 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 PRSS35Q8N3Z0 413 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 SLC30A7Q8NEW0 376 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 ALG14Q96F25 216 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 NKX6-2Q9C056 277 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-203ENST00000375274 PLEKHA3Q9HB20 300 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 ZNF346Q9UL40 294 aaKnown RBP10.54□□□□□ -0.72
PTCH1-203ENST00000375274 SERTM1A2A2V5 107 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 LINC01553A4QN01 128 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 TRAPPC2LH3BP13 241 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 ZNF728P0DKX0 622 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 PCBP3P57721 371 aaKnown RBP10.54□□□□□ -0.72
PTCH1-203ENST00000375274 ECH1Q13011 328 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 C2orf76Q3KRA6 126 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 SLC16A14Q7RTX9 510 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 PLPP5Q8NEB5 264 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 SECTM1Q8WVN6 248 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 TMED6Q8WW62 240 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 HSD17B8Q92506 261 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 MAP6Q96JE9 813 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 ENKD1Q9H0I2 346 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 HRH3Q9Y5N1 445 aa10.54□□□□□ -0.72
PTCH1-203ENST00000375274 CD79BP40259 229 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 RUNX2Q13950 521 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 ELAVL1Q15717 326 aaKnown RBP10.53□□□□□ -0.72
PTCH1-203ENST00000375274 TMEM201Q5SNT2 666 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 KCNRGQ8N5I3 272 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 OR2G2Q8NGZ5 317 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 SGK3Q96BR1 496 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 ZNF681Q96N22 645 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 EMC6Q9BV81 110 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 PAPOLGQ9BWT3 736 aaKnown RBP10.53□□□□□ -0.72
PTCH1-203ENST00000375274 SEMA4CQ9C0C4 833 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 BANF2Q9H503 90 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 GPATCH2Q9NW75 528 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 CCL27Q9Y4X3 112 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 CXorf51AA0A1B0GTR3 108 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 TBX19O60806 448 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 ATF1P18846 271 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 APLNRP35414 380 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 RAB5CP51148 216 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 HTRA3P83110 453 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 LINC00303Q3SY05 128 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 KIRREL2Q6UWL6 708 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 BCORP1Q8N888 145 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 C16orf52Q8NHV5 167 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 BAHD1Q8TBE0 780 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-203ENST00000375274 PSMF1Q92530 271 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 YIPF5Q969M3 257 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 RBMXL1Q96E39 390 aaKnown RBP10.53□□□□□ -0.72
PTCH1-203ENST00000375274 SLC23A1Q9UHI7 598 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 ST6GAL1P15907 406 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 FOLR3P41439 243 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 EEF1A2Q05639 463 aaKnown RBP10.53□□□□□ -0.72
PTCH1-203ENST00000375274 PDZK1IP1Q13113 114 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 CLINT1Q14677 625 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 CCL4L1Q8NHW4 92 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 ARHGDIGQ99819 225 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 MARVELD1Q9BSK0 173 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 SLC25A32Q9H2D1 315 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 TMEM100Q9NV29 134 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 MCTS1Q9ULC4 181 aaKnown RBP10.53□□□□□ -0.72
PTCH1-203ENST00000375274 TP53TG5Q9Y2B4 290 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 COL4A1P02462 1669 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 TSTD3H0UI37 97 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 OR4E1P0C645 316 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 PSMB6P28072 239 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 SLC35A1P78382 337 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 RAB31Q13636 194 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 INSL4Q14641 139 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 OGFOD3Q6PK18 319 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 C10orf111Q8N326 155 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 WDSUB1Q8N9V3 476 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 ZG16BQ96DA0 208 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 FKRPQ9H9S5 495 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 SLC22A13Q9Y226 551 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 CSAG2Q9Y5P2 127 aa10.53□□□□□ -0.72
PTCH1-203ENST00000375274 A0A0U1RQK1 487 aa10.52□□□□□ -0.72
PTCH1-203ENST00000375274 C2orf72A6NCS6 295 aa10.52□□□□□ -0.72
PTCH1-203ENST00000375274 SCRG1O75711 98 aa10.52□□□□□ -0.72
PTCH1-203ENST00000375274 POU3F2P20265 443 aaPredicted RBP10.52□□□□□ -0.72
PTCH1-203ENST00000375274 OR10K2Q6IF99 312 aa10.52□□□□□ -0.72
PTCH1-203ENST00000375274 ADAM5Q6NVV9 412 aa10.52□□□□□ -0.72
PTCH1-203ENST00000375274 ANKRD33Q7Z3H0 272 aa10.52□□□□□ -0.72
PTCH1-203ENST00000375274 OR2L13Q8N349 312 aa10.52□□□□□ -0.72
PTCH1-203ENST00000375274 ZBTB44Q8NCP5 570 aa10.52□□□□□ -0.72
PTCH1-203ENST00000375274 OR4C16Q8NGL9 310 aa10.52□□□□□ -0.72
PTCH1-203ENST00000375274 OR10Z1Q8NGY1 313 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms