RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 VSTM2BA6NLU5 285 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 HSPB2A8KAH6 182 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 GPR37O15354 613 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 SUSD5O60279 629 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 SELENOFO60613 162 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 OR6A2O95222 327 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 AHSA1O95433 338 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 ADRB1P08588 477 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 FBP1P09467 338 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 RAB4AP20338 218 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 GPX4P36969 197 aaPredicted RBP7.42□□□□□ -1.22
UBR4-202ENST00000375224 RFX2P48378 723 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 TAS2R60P59551 318 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 RRAS2P62070 204 aaPredicted RBP7.42□□□□□ -1.22
UBR4-202ENST00000375224 TSPAN5P62079 268 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 IL18Q14116 193 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 HSPB2Q16082 182 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 LINC01590Q5TEZ4 76 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 PEAR1Q5VY43 1037 aaPredicted RBP7.42□□□□□ -1.22
UBR4-202ENST00000375224 PWWP2BQ6NUJ5 590 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 EXD3Q8N9H8 876 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 C2CD4CQ8TF44 421 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 ADAD1Q96M93 576 aaKnown RBP7.42□□□□□ -1.22
UBR4-202ENST00000375224 GPR137Q96N19 417 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 MED28Q9H204 178 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 MED11Q9P086 117 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 KIF25Q9UIL4 384 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 FER1L5A0AVI2 2057 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 ANKUB1A6NFN9 424 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 ANKRD61A6NGH8 418 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 NCR1O76036 304 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 CER1O95813 267 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 CFIP05156 583 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 F13BP05160 661 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 ACAA1P09110 424 aaPredicted RBP7.42□□□□□ -1.22
UBR4-202ENST00000375224 CSF3P09919 207 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 SLC2A2P11168 524 aaPredicted RBP7.42□□□□□ -1.22
UBR4-202ENST00000375224 TDGF1P13385 188 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 GNALP38405 381 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 TRA2AQ13595 282 aaKnown RBP eCLIP7.42□□□□□ -1.223e-7■■□□□ 14
UBR4-202ENST00000375224 IL11RAQ14626 422 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 INSL4Q14641 139 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 CCDC157Q569K6 752 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 TCEAL6Q6IPX3 200 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 SFXN4Q6P4A7 337 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 PAPD4Q6PIY7 484 aaKnown RBP7.42□□□□□ -1.22
UBR4-202ENST00000375224 SHISA6Q6ZSJ9 500 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 OVCH2Q7RTZ1 564 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 CPEB2Q7Z5Q1 589 aaKnown RBP7.42□□□□□ -1.22
UBR4-202ENST00000375224 EID2Q8N6I1 236 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 DUSP19Q8WTR2 217 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 SLC26A1Q9H2B4 701 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 PPP1R3EQ9H7J1 279 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 PURGQ9UJV8 347 aaKnown RBP7.42□□□□□ -1.22
UBR4-202ENST00000375224 TXNL1O43396 289 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 ZFAND5O76080 213 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 HLA-DQB1P01920 261 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 RAC2P15153 192 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 MSX1P28360 303 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 HCCSP53701 268 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 USF2Q15853 346 aaPredicted RBP7.42□□□□□ -1.22
UBR4-202ENST00000375224 C1orf140Q5VVS0 124 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 RPTNQ6XPR3 784 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 Q8N402 240 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 APCDD1LQ8NCL9 501 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 ZNF248Q8NDW4 579 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 IFI44Q8TCB0 444 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 TSPAN32Q96QS1 320 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 RTN4RQ9BZR6 473 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 ABRACLQ9P1F3 81 aa7.42□□□□□ -1.22
UBR4-202ENST00000375224 NXT1Q9UKK6 140 aaKnown RBP7.42□□□□□ -1.22
UBR4-202ENST00000375224 ZNF346Q9UL40 294 aaKnown RBP7.42□□□□□ -1.22
UBR4-202ENST00000375224 SDK1Q7Z5N4 2213 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 TUBAL3A6NHL2 446 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 LGALS8O00214 317 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 FLRT2O43155 660 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 NPIPB7O75200 414 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 RAB3DO95716 219 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 FGF5P12034 268 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 APOBEC1P41238 236 aaKnown RBP7.41□□□□□ -1.22
UBR4-202ENST00000375224 ZXDAP98168 799 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 TOMM34Q15785 309 aaPredicted RBP7.41□□□□□ -1.22
UBR4-202ENST00000375224 OR2B11Q5JQS5 317 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 BICRALQ6AI39 1079 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 RDH10Q8IZV5 341 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 GHDCQ8N2G8 530 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 SLC38A9Q8NBW4 561 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 ZPLD1Q8TCW7 415 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 SMAP2Q8WU79 429 aaPredicted RBP7.41□□□□□ -1.22
UBR4-202ENST00000375224 NXPE2Q96DL1 559 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 SRA1Q9HD15 236 aaKnown RBP7.41□□□□□ -1.22
UBR4-202ENST00000375224 ZNF281Q9Y2X9 895 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 IGHV3-20A0A0C4DH32 117 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 TMEM72A0PK05 275 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 GMFGO60234 142 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 ZNF432O94892 652 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 UCHL1P09936 223 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 COX5BP10606 129 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 LAP3P28838 519 aa7.41□□□□□ -1.22
UBR4-202ENST00000375224 RBMS1P29558 406 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms