RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 EIF1BO60739 113 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 TNFSF15O95150 251 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 MPZL1O95297 269 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 RAF1P04049 648 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 RBMS1P29558 406 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 DNASE1L1P49184 302 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 CYB561P49447 251 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 RIDAP52758 137 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 GPR85P60893 370 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 POU4F3Q15319 338 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 WDR38Q5JTN6 314 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ZNF544Q6NX49 715 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 DEGS2Q6QHC5 323 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ZNF676Q8N7Q3 588 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 GPR148Q8TDV2 347 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 HTRA1Q92743 480 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 JSRP1Q96MG2 331 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 IP6K3Q96PC2 410 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 B3GAT2Q9NPZ5 323 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 RHBDL2Q9NX52 303 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 MRPS18CQ9Y3D5 142 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 PTPRZ1P23471 2315 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 A0A087WV48 116 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 A0A0G2JMM0 328 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 A0A1W2PPB8 328 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 A0A1W2PRS3 328 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 GJE1A6NN92 205 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 KIR3DP1A8MWS1 328 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 FAM25AB3EWG3 89 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 FAM25CB3EWG5 89 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 FAM25GB3EWG6 89 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 STMND1H3BQB6 276 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 DNPH1O43598 174 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 VAMP5O95183 116 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 SLC2A2P11168 524 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ZNF43P17038 809 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 CLRN1P58418 232 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 B3GALT5-AS1P59052 145 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 CSNK2A1P68400 391 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 IL18Q14116 193 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 HIST3H3Q16695 136 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 OTPQ5XKR4 325 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 SAMD12Q8N8I0 201 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 THOC3Q96J01 351 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 CMTM3Q96MX0 182 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 GFI1Q99684 422 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 EXTL2Q9UBQ6 330 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 LRP12Q9Y561 859 aa16.05■□□□□ 0.16
HLA-DQB1-201ENST00000374943 FAM186AA6NE01 2351 aa16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 A0A1B0GTH9 108 aa16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 LRRC3CA6NJW4 275 aa16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 RAMP1O60894 148 aa16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 SRSF10O75494 262 aaKnown RBP16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 EIF4EP06730 217 aaKnown RBP16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 SPNP16150 400 aa16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 LAP3P28838 519 aa16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 TALDO1P37837 337 aa16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 P2RY14Q15391 338 aa16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 SLC25A47Q6Q0C1 308 aa16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 SYT9Q86SS6 491 aa16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 GPAT4Q86UL3 456 aa16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 CATSPERDQ86XM0 798 aa16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 KCNE4Q8WWG9 221 aa16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 KCNJ15Q99712 375 aa16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 NAA11Q9BSU3 229 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 SLITRK2Q9H156 845 aa16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ANKRD10Q9NXR5 420 aa16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 TEKT2Q9UIF3 430 aa16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 AK6Q9Y3D8 172 aaKnown RBP16.04■□□□□ 0.16
HLA-DQB1-201ENST00000374943 TRABD2BA6NFA1 517 aa16.03■□□□□ 0.16
HLA-DQB1-201ENST00000374943 WNT11O96014 354 aa16.03■□□□□ 0.16
HLA-DQB1-201ENST00000374943 NR2C1P13056 603 aa16.03■□□□□ 0.16
HLA-DQB1-201ENST00000374943 CAMK2DQ13557 499 aa16.03■□□□□ 0.16
HLA-DQB1-201ENST00000374943 CCBE1Q6UXH8 406 aaPredicted RBP16.03■□□□□ 0.16
HLA-DQB1-201ENST00000374943 DCXRQ7Z4W1 244 aa16.03■□□□□ 0.16
HLA-DQB1-201ENST00000374943 Q8N402 240 aa16.03■□□□□ 0.16
HLA-DQB1-201ENST00000374943 IL17RDQ8NFM7 739 aa16.03■□□□□ 0.16
HLA-DQB1-201ENST00000374943 OR4M1Q8NGD0 313 aa16.03■□□□□ 0.16
HLA-DQB1-201ENST00000374943 SNRNP27Q8WVK2 155 aaKnown RBP16.03■□□□□ 0.16
HLA-DQB1-201ENST00000374943 C11orf40Q8WZ69 217 aa16.03■□□□□ 0.16
HLA-DQB1-201ENST00000374943 SPATA2Q9UM82 520 aa16.03■□□□□ 0.16
HLA-DQB1-201ENST00000374943 MRPS18BQ9Y676 258 aaKnown RBP16.03■□□□□ 0.16
HLA-DQB1-201ENST00000374943 R4GMQ9 66 aa16.03■□□□□ 0.16
HLA-DQB1-201ENST00000374943 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 AIPO00170 330 aa16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 PAHP00439 452 aa16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 PNPP00491 289 aa16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 KLK2P20151 261 aa16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 CD97P48960 835 aa16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 AGFG1P52594 562 aaKnown RBP16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 OR7E24Q6IFN5 339 aa16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 STAC2Q6ZMT1 411 aa16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 ASB18Q6ZVZ8 466 aa16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 CADM3Q8N126 398 aa16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 OR10H5Q8NGA6 315 aa16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 RNF133Q8WVZ7 376 aa16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 MCHR2Q969V1 340 aa16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 MRI1Q9BV20 369 aa16.02■□□□□ 0.16
HLA-DQB1-201ENST00000374943 OR2B2Q9GZK3 357 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms