RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 PM20D2Q8IYS1 436 aa13.95□□□□□ -0.18
CCDC40-202ENST00000374876 ZNF441Q8N8Z8 693 aa13.95□□□□□ -0.18
CCDC40-202ENST00000374876 THEM6Q8WUY1 208 aa13.95□□□□□ -0.18
CCDC40-202ENST00000374876 AKAP1Q92667 903 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCDC40-202ENST00000374876 MAP6Q96JE9 813 aa13.95□□□□□ -0.18
CCDC40-202ENST00000374876 IMMP1LQ96LU5 166 aa13.95□□□□□ -0.18
CCDC40-202ENST00000374876 INTS14Q96SY0 518 aa13.95□□□□□ -0.18
CCDC40-202ENST00000374876 DPAGT1Q9H3H5 408 aa13.95□□□□□ -0.18
CCDC40-202ENST00000374876 MCUBQ9NWR8 336 aa13.95□□□□□ -0.18
CCDC40-202ENST00000374876 PCDHGA9Q9Y5G4 932 aaKnown RBP13.95□□□□□ -0.18
CCDC40-202ENST00000374876 TMED7-TICAM2A0A0A6YYA0 188 aa13.94□□□□□ -0.18
CCDC40-202ENST00000374876 AKR7A3O95154 331 aa13.94□□□□□ -0.18
CCDC40-202ENST00000374876 DHFRP00374 187 aa13.94□□□□□ -0.18
CCDC40-202ENST00000374876 HPP00738 406 aa13.94□□□□□ -0.18
CCDC40-202ENST00000374876 ITGA3P26006 1051 aa13.94□□□□□ -0.18
CCDC40-202ENST00000374876 BTCP35070 178 aa13.94□□□□□ -0.18
CCDC40-202ENST00000374876 EGR3Q06889 387 aa13.94□□□□□ -0.18
CCDC40-202ENST00000374876 Q499Y3 187 aa13.94□□□□□ -0.18
CCDC40-202ENST00000374876 DPY19L4Q7Z388 723 aa13.94□□□□□ -0.18
CCDC40-202ENST00000374876 ASCC1Q8N9N2 400 aaKnown RBP13.94□□□□□ -0.18
CCDC40-202ENST00000374876 GFI1Q99684 422 aa13.94□□□□□ -0.18
CCDC40-202ENST00000374876 GALNT9Q9HCQ5 603 aa13.94□□□□□ -0.18
CCDC40-202ENST00000374876 TCF7L1Q9HCS4 588 aa13.94□□□□□ -0.18
CCDC40-202ENST00000374876 FRRS1LQ9P0K9 344 aa13.94□□□□□ -0.18
CCDC40-202ENST00000374876 TMED7Q9Y3B3 224 aa13.94□□□□□ -0.18
CCDC40-202ENST00000374876 BOLA1Q9Y3E2 137 aa13.94□□□□□ -0.18
CCDC40-202ENST00000374876 V9GY05 133 aa13.94□□□□□ -0.18
CCDC40-202ENST00000374876 FADS1O60427 444 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 TMEM127O75204 238 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 ABHD16AO95870 558 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 PLGP00747 810 aaPredicted RBP13.93□□□□□ -0.18
CCDC40-202ENST00000374876 LY6DQ14210 128 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 SGCBQ16585 318 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 BTBD16Q32M84 506 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 FAM69AQ5T7M9 428 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 BCL2L15Q5TBC7 163 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 PCSK4Q6UW60 755 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 SIAH3Q8IW03 269 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 CMTM4Q8IZR5 234 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 GALNT16Q8N428 558 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 FDCSPQ8NFU4 85 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 THOC3Q96J01 351 aaKnown RBP13.93□□□□□ -0.18
CCDC40-202ENST00000374876 TMEM246Q9BRR3 403 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 PTDSS2Q9BVG9 487 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 NUDT15Q9NV35 164 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 RABL2AQ9UBK7 228 aaPredicted RBP13.93□□□□□ -0.18
CCDC40-202ENST00000374876 RALYQ9UKM9 306 aaKnown RBP13.93□□□□□ -0.18
CCDC40-202ENST00000374876 RABL2BQ9UNT1 228 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 DOCK10Q96BY6 2186 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 PIEZO2Q9H5I5 2752 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 TRAV6A0A075B6T7 132 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 A0A1W2PQ72 361 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 A8MVM7 634 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 PHYHO14832 338 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 GSTZ1O43708 216 aaPredicted RBP13.93□□□□□ -0.18
CCDC40-202ENST00000374876 OR6A2O95222 327 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 WISP1O95388 367 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 HLA-DQA2P01906 255 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 ALOX5APP20292 161 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 AIMP2Q13155 320 aaKnown RBP13.93□□□□□ -0.18
CCDC40-202ENST00000374876 GRINAQ7Z429 371 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 IZUMO1Q8IYV9 350 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 GPR119Q8TDV5 335 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 DUSP19Q8WTR2 217 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 NSMAFQ92636 917 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 ABHD17AQ96GS6 310 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 COMMD4Q9H0A8 199 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 LIN7BQ9HAP6 207 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 TAS2R10Q9NYW0 307 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 NUBP2Q9Y5Y2 271 aa13.93□□□□□ -0.18
CCDC40-202ENST00000374876 K7EM74 188 aa13.92□□□□□ -0.18
CCDC40-202ENST00000374876 CTDSPLO15194 276 aa13.92□□□□□ -0.18
CCDC40-202ENST00000374876 GPANK1O95872 356 aa13.92□□□□□ -0.18
CCDC40-202ENST00000374876 ERP29P30040 261 aaKnown RBP13.92□□□□□ -0.18
CCDC40-202ENST00000374876 RPS27P42677 84 aaKnown RBP13.92□□□□□ -0.18
CCDC40-202ENST00000374876 SOX2P48431 317 aa13.92□□□□□ -0.18
CCDC40-202ENST00000374876 CENPAP49450 140 aa13.92□□□□□ -0.18
CCDC40-202ENST00000374876 RPL27P61353 136 aaKnown RBP13.92□□□□□ -0.18
CCDC40-202ENST00000374876 RNF4P78317 190 aa13.92□□□□□ -0.18
CCDC40-202ENST00000374876 ACKR1Q16570 336 aa13.92□□□□□ -0.18
CCDC40-202ENST00000374876 C1orf140Q5VVS0 124 aa13.92□□□□□ -0.18
CCDC40-202ENST00000374876 PRSS45Q7RTY3 260 aa13.92□□□□□ -0.18
CCDC40-202ENST00000374876 ADGRG3Q86Y34 549 aa13.92□□□□□ -0.18
CCDC40-202ENST00000374876 ZNF676Q8N7Q3 588 aa13.92□□□□□ -0.18
CCDC40-202ENST00000374876 SMIM4Q8WVI0 70 aa13.92□□□□□ -0.18
CCDC40-202ENST00000374876 MRI1Q9BV20 369 aa13.92□□□□□ -0.18
CCDC40-202ENST00000374876 PLSCR3Q9NRY6 295 aa13.92□□□□□ -0.18
CCDC40-202ENST00000374876 ANKRD10Q9NXR5 420 aa13.92□□□□□ -0.18
CCDC40-202ENST00000374876 A0A0A6YYJ9 748 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 PRSS37A4D1T9 235 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 ERVH48-1M5A8F1 160 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 ZNF432O94892 652 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 GIFP27352 417 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 SLC26A5P58743 744 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 MAB21L1Q13394 359 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 STAC2Q6ZMT1 411 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 FCRLAQ7L513 359 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 LINGO2Q7L985 606 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 OR2G2Q8NGZ5 317 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 C7orf50Q9BRJ6 194 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms