RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 FAM206AQ9NX38 181 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 A0A0G2JMM0 328 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 A0A1W2PPB8 328 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 A0A1W2PRS3 328 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 OR2M5A3KFT3 312 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 KIR3DP1A8MWS1 328 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 CDRT15L2A8MXV6 281 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 SLC43A1O75387 559 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 IGLV3-1P01715 115 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 MMP15P51511 669 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 FMODQ06828 376 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 SCN1BQ07699 218 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 HYAL4Q2M3T9 481 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 ACER2Q5QJU3 275 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 KCTD18Q6PI47 426 aaPredicted RBP11.18□□□□□ -0.62
PRPF4-202ENST00000374199 LRRC69Q6ZNQ3 347 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 GPR148Q8TDV2 347 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 SF3B5Q9BWJ5 86 aaKnown RBP11.18□□□□□ -0.62
PRPF4-202ENST00000374199 RERGLQ9H628 205 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 ZNF275Q9NSD4 429 aaPredicted RBP11.18□□□□□ -0.62
PRPF4-202ENST00000374199 HPF1Q9NWY4 346 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 MED29Q9NX70 200 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 FOXJ3Q9UPW0 622 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 SMIM30A4D0T7 59 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 FAM47E-STBD1D6RA91 191 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 AGRPO00253 132 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 EIF1BO60739 113 aaKnown RBP11.18□□□□□ -0.62
PRPF4-202ENST00000374199 RAMP1O60894 148 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 VAMP5O95183 116 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 CD82P27701 267 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 LAP3P28838 519 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 MFGE8Q08431 387 aaPredicted RBP11.18□□□□□ -0.62
PRPF4-202ENST00000374199 UBE2NLQ5JXB2 153 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 ABLIM2Q6H8Q1 611 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 CCBE1Q6UXH8 406 aaPredicted RBP11.18□□□□□ -0.62
PRPF4-202ENST00000374199 UEVLDQ8IX04 471 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 ZIC4Q8N9L1 334 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 OR4M1Q8NGD0 313 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 TRMT10AQ8TBZ6 339 aaKnown RBP11.18□□□□□ -0.62
PRPF4-202ENST00000374199 ADAMTS14Q8WXS8 1223 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 ELOVL3Q9HB03 270 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 PARD6AQ9NPB6 346 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 DEPPQ9NTK1 212 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 ZDBF2Q9HCK1 2354 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 BIDP55957 195 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 ADAM8P78325 824 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 TOMM20Q15388 145 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 KRTAP27-1Q3LI81 207 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 IDNKQ5T6J7 187 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 PRAMEF20Q5VT98 475 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 KDM8Q8N371 416 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 OR5H6Q8NGV6 325 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 RBMX2Q9Y388 322 aaKnown RBP11.18□□□□□ -0.62
PRPF4-202ENST00000374199 ETV7Q9Y603 341 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 LHFPL6Q9Y693 200 aa11.18□□□□□ -0.62
PRPF4-202ENST00000374199 H3BML4 177 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 NEURL1O76050 574 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 MPZL1O95297 269 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 HNRNPCP07910 306 aaKnown RBP eCLIP11.17□□□□□ -0.62
PRPF4-202ENST00000374199 KLK2P20151 261 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 STPG1Q5TH74 334 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 CREB3L2Q70SY1 520 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 NRARPQ7Z6K4 114 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 IP6K3Q96PC2 410 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 PIGQQ9BRB3 760 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 C11orf54Q9H0W9 315 aaPredicted RBP11.17□□□□□ -0.62
PRPF4-202ENST00000374199 A0A0C4DFX4 3053 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 LOC101059948A0A1B0GTJ6 334 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 UBL3O95164 117 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 IGHG1P01857 330 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 TRAPPC2P0DI81 140 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 TRAPPC2BP0DI82 140 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 CCL1P22362 96 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 PITPNBP48739 271 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 SLC36A2Q495M3 483 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 PYHIN1Q6K0P9 492 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 UBQLNLQ8IYU4 475 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 Q8N402 240 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 SLC25A28Q96A46 364 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 NABP1Q96AH0 204 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 GNRHR2Q96P88 292 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 OR2M2Q96R28 347 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 DDX28Q9NUL7 540 aaKnown RBP11.17□□□□□ -0.62
PRPF4-202ENST00000374199 DOCK10Q96BY6 2186 aa11.17□□□□□ -0.62
PRPF4-202ENST00000374199 A0A0G2JMP0 313 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 A0A0X1KG70 313 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 MASP2O00187 686 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 HPNP05981 417 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 JMJD7P0C870 316 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 CNR1P21554 472 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 BTCP35070 178 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 RPS27P42677 84 aaKnown RBP11.16□□□□□ -0.62
PRPF4-202ENST00000374199 RPS15P62841 145 aaKnown RBP11.16□□□□□ -0.62
PRPF4-202ENST00000374199 EIF2B1Q14232 305 aaKnown RBP11.16□□□□□ -0.62
PRPF4-202ENST00000374199 HES3Q5TGS1 186 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 LRFN4Q6PJG9 635 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 PRSS45Q7RTY3 260 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 OR4M2Q8NGB6 313 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 OR51A4Q8NGJ6 313 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 ASB5Q8WWX0 329 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms