RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 AARDQ4LEZ3 155 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 HACD4Q5VWC8 232 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 RPL22L1Q6P5R6 122 aaKnown RBP4.9□□□□□ -1.63
ATG4A-204ENST00000372246 UNQ9370/PRO34162Q6UXP9 181 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 RAB11FIP2Q7L804 512 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 NAXDQ8IW45 347 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 LRRC25Q8N386 305 aaPredicted RBP4.9□□□□□ -1.63
ATG4A-204ENST00000372246 CSNK1A1LQ8N752 337 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 OR2L5Q8NG80 312 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 OR2L3Q8NG85 312 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 OR10G6Q8NH81 332 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 NUDCD2Q8WVJ2 157 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 PATE1Q8WXA2 126 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 RSPRY1Q96DX4 576 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 C14orf79Q96F83 325 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 ADAD1Q96M93 576 aaKnown RBP4.9□□□□□ -1.63
ATG4A-204ENST00000372246 CMTM3Q96MX0 182 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 IP6K3Q96PC2 410 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 ALG12Q9BV10 488 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 SFXN1Q9H9B4 322 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 MTFP1Q9UDX5 166 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 ICAM5Q9UMF0 924 aa4.9□□□□□ -1.63
ATG4A-204ENST00000372246 TUBAL3A6NHL2 446 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 A6NLC8 198 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 SHISA8B8ZZ34 492 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 C11orf98E9PRG8 122 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 H0YIZ8 118 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 K7EQS6 105 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 SULT2B1O00204 365 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 MOSPD3O75425 235 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 FBXO24O75426 580 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 CLEC3AO75596 197 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF205O95201 554 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 LATS1O95835 1130 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 ARG1P05089 322 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 IL5P05113 134 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 SERPINA5P05154 406 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 OR2T7P0C7T2 308 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 NID1P14543 1247 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 MGMTP16455 207 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 TYRP1P17643 537 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 NME2P22392 152 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 CD34P28906 385 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 P2RY2P41231 377 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 GMFBP60983 142 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 SPOCK1Q08629 439 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 SKP2Q13309 424 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 MLC1Q15049 377 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 KRBOX4Q5JUW0 171 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 LINC01590Q5TEZ4 76 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 SAMD5Q5TGI4 173 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 PRAMEF17Q5VTA0 474 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 C1QL3Q5VWW1 255 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 METRNLQ641Q3 311 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 C11orf87Q6NUJ2 197 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 UNQ6494/PRO21346Q6UXR6 183 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 TMEM64Q6YI46 380 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 TMPRSS11FQ6ZWK6 438 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 MTSS1LQ765P7 747 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 NAA40Q86UY6 237 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 TMEM17Q86X19 198 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 TCEAL8Q8IYN2 117 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 EIF4E3Q8N5X7 224 aaKnown RBP4.89□□□□□ -1.63
ATG4A-204ENST00000372246 METTL27Q8N6F8 245 aaPredicted RBP4.89□□□□□ -1.63
ATG4A-204ENST00000372246 PNLDC1Q8NA58 520 aaKnown RBP4.89□□□□□ -1.63
ATG4A-204ENST00000372246 CLEC1AQ8NC01 280 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 OR13C8Q8NGS7 320 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 OR6N1Q8NGY5 312 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 OR2T27Q8NH04 317 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 OR4C3Q8NH37 302 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 OR51F2Q8NH61 342 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 TSEN15Q8WW01 171 aaKnown RBP4.89□□□□□ -1.63
ATG4A-204ENST00000372246 SLC19A3Q9BZV2 496 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 SLC25A32Q9H2D1 315 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 FN3KRPQ9HA64 309 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 PELI2Q9HAT8 420 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 ACKR4Q9NPB9 350 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 LRIT1Q9P2V4 623 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF629Q9UEG4 869 aaPredicted RBP4.89□□□□□ -1.63
ATG4A-204ENST00000372246 NDRG3Q9UGV2 375 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 MSRAQ9UJ68 235 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 KLK13Q9UKR3 277 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 TNFSF18Q9UNG2 199 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 RFNGQ9Y644 331 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 NBEAQ8NFP9 2946 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 C5orf51A6NDU8 294 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 DBX1A6NMT0 343 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 PRAMEF26H0Y7S4 382 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 H0Y8X5 98 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 EFSO43281 561 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 BCL2L11O43521 198 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 TBX19O60806 448 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 APOC1P02654 83 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 ACRP10323 421 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF44P15621 663 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 C4BPBP20851 252 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 CSRP1P21291 193 aaKnown RBP4.89□□□□□ -1.63
ATG4A-204ENST00000372246 SDHAP31040 664 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 ACAA2P42765 397 aaKnown RBP4.89□□□□□ -1.63
ATG4A-204ENST00000372246 KIR3DL2P43630 455 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms