RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 MEPEQ9NQ76 525 aaPredicted RBP10.36□□□□□ -0.75
TSPAN1-201ENST00000372003 KLK11Q9UBX7 282 aa10.36□□□□□ -0.75
TSPAN1-201ENST00000372003 MTFP1Q9UDX5 166 aa10.36□□□□□ -0.75
TSPAN1-201ENST00000372003 OR5V1Q9UGF6 321 aa10.36□□□□□ -0.75
TSPAN1-201ENST00000372003 SLC22A7Q9Y694 548 aa10.36□□□□□ -0.75
TSPAN1-201ENST00000372003 SNRNP200O75643 2136 aaKnown RBP10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 LOC101059948A0A1B0GTJ6 334 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 RFPL4AA6NLU0 287 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 RFPL4AL1F8VTS6 287 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 ARPC5O15511 151 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 KLK10O43240 276 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 XRCC3O43542 346 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 PRAMEF2O60811 474 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 RDH16O75452 317 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 CLUP10909 449 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 FUT1P19526 365 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 ANXA7P20073 488 aaKnown RBP10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 MPGP29372 298 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 PTGER1P34995 402 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 FOXL2P58012 376 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 SRSF4Q08170 494 aaKnown RBP10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 FGL1Q08830 312 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 ZNF385CQ66K41 422 aaPredicted RBP10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 UQCC3Q6UW78 93 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 ALKAL2Q6UX46 152 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 LINC00114Q6XXX2 140 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 DPY19L2P2Q6ZN68 376 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 VASH2Q86V25 355 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 DTX1Q86Y01 620 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 CCDC36Q8IYA8 594 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 DND1Q8IYX4 353 aaKnown RBP10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 SHISA5Q8N114 240 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 ZNF248Q8NDW4 579 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 PXT1Q8NFP0 134 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 OR5T3Q8NGG3 340 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 OR52E2Q8NGJ4 325 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 CCDC107Q8WV48 283 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 KCNE4Q8WWG9 221 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 MRPS24Q96EL2 167 aaKnown RBP10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 PHYHIPLQ96FC7 376 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 C1orf198Q9H425 327 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 SLC17A5Q9NRA2 495 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 SLC22A11Q9NSA0 550 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 MRPL15Q9P015 296 aaKnown RBP10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 UPB1Q9UBR1 384 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 GPN3Q9UHW5 284 aaPredicted RBP10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 GNG8Q9UK08 70 aa10.35□□□□□ -0.75
TSPAN1-201ENST00000372003 NCOR2Q9Y618 2525 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 AKAP13Q12802 2813 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 ADAMTS20P59510 1910 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 TRAV27A0A087WT01 109 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 TRBV5-5A0A0J9YX44 114 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 A0A1W2PPK0 400 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 A0A1W2PS29 197 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 DNASE2O00115 360 aaPredicted RBP10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 CDC123O75794 336 aaPredicted RBP10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 NSA2O95478 260 aaKnown RBP10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 SMIM10L1P0DMW3 83 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 VSIG10L2P0DP72 767 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 ZNF10P21506 573 aaPredicted RBP10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 FBLP22087 321 aaKnown RBP10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 CDK2P24941 298 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 DLSTP36957 453 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 MAP3K8P41279 467 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 SRSF6Q13247 344 aaKnown RBP10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 CLN3Q13286 438 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 FHL1Q13642 323 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 ZNF345Q14585 488 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 ETFDHQ16134 617 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 Q499Y3 187 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 PABPC1L2AQ5JQF8 200 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 SFRP5Q5T4F7 317 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 ZNF684Q5T5D7 378 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 FAM69BQ5VUD6 431 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 LRFN4Q6PJG9 635 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 STAC2Q6ZMT1 411 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 SHISA6Q6ZSJ9 500 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 SYT9Q86SS6 491 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 PRSS58Q8IYP2 241 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 CYB561A3Q8NBI2 242 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 OR51A7Q8NH64 312 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 CT55Q8WUE5 264 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 HOXB13Q92826 284 aaPredicted RBP10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 MVB12AQ96EY5 273 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 SMIM10Q96HG1 83 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 TNFRSF13CQ96RJ3 184 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 CCNL2Q96S94 520 aaPredicted RBP10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 MNTQ99583 582 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 NMNAT2Q9BZQ4 307 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 TCF7L1Q9HCS4 588 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 EXOSC3Q9NQT5 275 aaKnown RBP10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 RAXQ9Y2V3 346 aa10.34□□□□□ -0.75
TSPAN1-201ENST00000372003 ACOD1A6NK06 481 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 TTLL8A6PVC2 850 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 C9J4A7 227 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 H0YIG0 161 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 TEX46H3BTG2 121 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 H3BUI4 141 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 PYCARD-AS1I3L0S3 204 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 SULT1C2O00338 296 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms