RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ZIC5Q96T25 663 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 BARX1Q9HBU1 254 aaPredicted RBP14.1□□□□□ -0.15
COL5A1-201ENST00000371817 ENSAO43768 121 aaKnown RBP14.1□□□□□ -0.15
COL5A1-201ENST00000371817 ADH4P08319 380 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 GSTP1P09211 210 aaKnown RBP14.1□□□□□ -0.15
COL5A1-201ENST00000371817 ELOBQ15370 118 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 PRICKLE2Q7Z3G6 844 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 PI4KAP42356 2102 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 RAB27BO00194 218 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 BCL6P41182 706 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 C9orf152Q5JTZ5 239 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 SLC6A18Q96N87 628 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 PELI2Q9HAT8 420 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 OBP2BQ9NPH6 170 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 IL17BQ9UHF5 180 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 NXT1Q9UKK6 140 aaKnown RBP14.1□□□□□ -0.15
COL5A1-201ENST00000371817 ARSDP51689 593 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 WNT7BP56706 349 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 C6orf132Q5T0Z8 1188 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 SLC16A12Q6ZSM3 486 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 MBOAT2Q6ZWT7 520 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 RTP4Q96DX8 246 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 TP53RKQ96S44 253 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 APC2O95996 2303 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 HMGN2P05204 90 aaKnown RBP14.1□□□□□ -0.15
COL5A1-201ENST00000371817 SIX1Q15475 284 aaPredicted RBP14.1□□□□□ -0.15
COL5A1-201ENST00000371817 SYT9Q86SS6 491 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 LRP11Q86VZ4 500 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 PRR22Q8IZ63 422 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 MEGF10Q96KG7 1140 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 SLAMF8Q9P0V8 285 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 ANKRD61A6NGH8 418 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 GPR171O14626 319 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 LTC4SQ16873 150 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 TMEM201Q5SNT2 666 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 ANKRD36CQ5JPF3 1778 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 ADAM11O75078 769 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 COX5AP20674 150 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 IVDP26440 423 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 ZNF813Q6ZN06 617 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 SLC35B3Q9H1N7 401 aa14.1□□□□□ -0.15
COL5A1-201ENST00000371817 EXOGQ9Y2C4 368 aaKnown RBP14.1□□□□□ -0.15
COL5A1-201ENST00000371817 A0A0B4J203 849 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 H3BVH4 76 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 OTX2P32243 289 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 HTR6P50406 440 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 EOGTQ5NDL2 527 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 MRPL2Q5T653 305 aaKnown RBP14.09□□□□□ -0.15
COL5A1-201ENST00000371817 SCAMP4Q969E2 229 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 UCN3Q969E3 161 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 STACQ99469 402 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 PTDSS2Q9BVG9 487 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 LHX6Q9UPM6 363 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 ARRB2P32121 409 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 SPINT3P49223 89 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 LIMK1P53667 647 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 LAMB4A4D0S4 1761 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 C5orf52A6NGY3 159 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 SMIM17P0DL12 118 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 COL9A3Q14050 684 aaPredicted RBP14.09□□□□□ -0.15
COL5A1-201ENST00000371817 IL17FQ96PD4 163 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 ATF6BQ99941 703 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 GPR174Q9BXC1 333 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 UBR1Q8IWV7 1749 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 MTCL1Q9Y4B5 1905 aaKnown RBP14.09□□□□□ -0.15
COL5A1-201ENST00000371817 FPR3P25089 353 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 RNASEKQ6P5S7 137 aaKnown RBP14.09□□□□□ -0.15
COL5A1-201ENST00000371817 GPR150Q8NGU9 434 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 NUMBLQ9Y6R0 609 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 COL3A1P02461 1466 aaPredicted RBP14.09□□□□□ -0.15
COL5A1-201ENST00000371817 GLTPD2A6NH11 291 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 IL1RNP18510 177 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 RPL11P62913 178 aaKnown RBP14.09□□□□□ -0.15
COL5A1-201ENST00000371817 AQP8O94778 261 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 UMODL1-AS1Q8N2C9 162 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 WDR89Q96FK6 387 aaPredicted RBP14.09□□□□□ -0.15
COL5A1-201ENST00000371817 PRDM7Q9NQW5 492 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 VDAC3Q9Y277 283 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 FLVCR1Q9Y5Y0 555 aa14.09□□□□□ -0.15
COL5A1-201ENST00000371817 CHRM2P08172 466 aa14.08□□□□□ -0.15
COL5A1-201ENST00000371817 RBP2P50120 134 aa14.08□□□□□ -0.15
COL5A1-201ENST00000371817 SPANXN5Q5MJ07 72 aa14.08□□□□□ -0.15
COL5A1-201ENST00000371817 FLVCR2Q9UPI3 526 aa14.08□□□□□ -0.15
COL5A1-201ENST00000371817 MYO5AQ9Y4I1 1855 aaKnown RBP14.08□□□□□ -0.15
COL5A1-201ENST00000371817 ZNF814B7Z6K7 855 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 ADAMTS4O75173 837 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 SLC10A3P09131 477 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 HOXB2P14652 356 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 POLR2IP36954 125 aaKnown RBP14.08□□□□□ -0.16
COL5A1-201ENST00000371817 PTRH1Q86Y79 214 aaKnown RBP14.08□□□□□ -0.16
COL5A1-201ENST00000371817 MFSD4AQ8N468 514 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 OR5D18Q8NGL1 313 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 FAM210BQ96KR6 192 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 C3orf30Q96M34 536 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 TAAR9Q96RI9 348 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 PLA2G12AQ9BZM1 189 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 SPATA31A5Q5VU36 1347 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 SPATA31A7Q8IWB4 1347 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 SLIT3O75094 1523 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 CSF3P09919 207 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms