RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 CITED4Q96RK1 184 aa8.53□□□□□ -1.04
TUBE1-201ENST00000368657 SLC35A5Q9BS91 424 aa8.53□□□□□ -1.04
TUBE1-201ENST00000368657 SLC19A3Q9BZV2 496 aa8.53□□□□□ -1.04
TUBE1-201ENST00000368657 RANBP3Q9H6Z4 567 aaPredicted RBP8.53□□□□□ -1.04
TUBE1-201ENST00000368657 EXD2Q9NVH0 621 aa8.53□□□□□ -1.04
TUBE1-201ENST00000368657 HECTD4Q9Y4D8 3996 aa8.53□□□□□ -1.04
TUBE1-201ENST00000368657 TMED7-TICAM2A0A0A6YYA0 188 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 LIPT2A6NK58 231 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 HMGB1P1B2RPK0 211 aaPredicted RBP8.52□□□□□ -1.05
TUBE1-201ENST00000368657 ZNF879B4DU55 563 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 UBDO15205 165 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 ENSAO43768 121 aaKnown RBP8.52□□□□□ -1.05
TUBE1-201ENST00000368657 UBL3O95164 117 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 PF4P02776 101 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 PF4V1P10720 104 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 THRBP10828 461 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 IL12AP29459 219 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 UCP2P55851 309 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 COX10Q12887 443 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 CEACAM7Q14002 265 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 RAB39AQ14964 217 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 GPAT3Q53EU6 434 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 PDZK1Q5T2W1 519 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 SLC27A4Q6P1M0 643 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 EIF3MQ7L2H7 374 aaKnown RBP8.52□□□□□ -1.05
TUBE1-201ENST00000368657 ZNF627Q7L945 461 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 CALHM3Q86XJ0 350 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 TRIML2Q8N7C3 387 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 PNPT1Q8TCS8 783 aaKnown RBP8.52□□□□□ -1.05
TUBE1-201ENST00000368657 NSMAFQ92636 917 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 NEIL1Q96FI4 390 aaPredicted RBP8.52□□□□□ -1.05
TUBE1-201ENST00000368657 CLPTM1LQ96KA5 538 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 SAMD8Q96LT4 415 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 SLCO1B3Q9NPD5 702 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 INTS9Q9NV88 658 aaKnown RBP8.52□□□□□ -1.05
TUBE1-201ENST00000368657 DCAF16Q9NXF7 216 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 ZNRD1Q9P1U0 126 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 CGGBP1Q9UFW8 167 aaPredicted RBP8.52□□□□□ -1.05
TUBE1-201ENST00000368657 MKLN1Q9UL63 735 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 RCE1Q9Y256 329 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 RASD1Q9Y272 281 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 TMED7Q9Y3B3 224 aa8.52□□□□□ -1.05
TUBE1-201ENST00000368657 CCDC154A6NI56 674 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 POLR3GO15318 223 aaPredicted RBP8.51□□□□□ -1.05
TUBE1-201ENST00000368657 FCMRO60667 390 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 SCN2BO60939 215 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 STX11O75558 287 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 ANP32DO95626 131 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 IL6P05231 212 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 CHRM2P08172 466 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 CHRM4P08173 479 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 CCDC159P0C7I6 412 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 UBTFL6P0CB48 400 aaPredicted RBP8.51□□□□□ -1.05
TUBE1-201ENST00000368657 MMP9P14780 707 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 H2AFXP16104 143 aaPredicted RBP8.51□□□□□ -1.05
TUBE1-201ENST00000368657 TNFRSF1AP19438 455 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 SLC6A2P23975 617 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 CDKN2CP42773 168 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 STX1BP61266 288 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 HPCAP84074 193 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 DGCR2P98153 550 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 PMS2P3Q13401 168 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 OR7A5Q15622 319 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 ZNF141Q15928 474 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 GSTA3Q16772 222 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 PDCD4Q53EL6 469 aaKnown RBP8.51□□□□□ -1.05
TUBE1-201ENST00000368657 ZMAT1Q5H9K5 638 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 NLRC3Q7RTR2 1065 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 HMGN2P46Q86SG4 172 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 SYT9Q86SS6 491 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 MIER2Q8N344 545 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 PIK3C3Q8NEB9 887 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 PPP1R35Q8TAP8 253 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 GEMIN6Q8WXD5 167 aaKnown RBP8.51□□□□□ -1.05
TUBE1-201ENST00000368657 MAELQ96JY0 434 aaKnown RBP8.51□□□□□ -1.05
TUBE1-201ENST00000368657 C7orf26Q96N11 449 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 CCDC115Q96NT0 180 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 WDFY2Q96P53 400 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 SDF2Q99470 211 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 VIPAS39Q9H9C1 493 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 CLN8Q9UBY8 286 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 BTNL2Q9UIR0 455 aa8.51□□□□□ -1.05
TUBE1-201ENST00000368657 TMEM72A0PK05 275 aa8.5□□□□□ -1.05
TUBE1-201ENST00000368657 RFXANKO14593 260 aa8.5□□□□□ -1.05
TUBE1-201ENST00000368657 RAMP3O60896 148 aa8.5□□□□□ -1.05
TUBE1-201ENST00000368657 CLIC3O95833 236 aa8.5□□□□□ -1.05
TUBE1-201ENST00000368657 AGR2O95994 175 aa8.5□□□□□ -1.05
TUBE1-201ENST00000368657 AK1P00568 194 aa8.5□□□□□ -1.05
TUBE1-201ENST00000368657 C1QCP02747 245 aa8.5□□□□□ -1.05
TUBE1-201ENST00000368657 P2RY4P51582 365 aa8.5□□□□□ -1.05
TUBE1-201ENST00000368657 POLR2HP52434 150 aaKnown RBP8.5□□□□□ -1.05
TUBE1-201ENST00000368657 POLR2JP52435 117 aaKnown RBP8.5□□□□□ -1.05
TUBE1-201ENST00000368657 AQP5P55064 265 aa8.5□□□□□ -1.05
TUBE1-201ENST00000368657 CLDN17P56750 224 aa8.5□□□□□ -1.05
TUBE1-201ENST00000368657 ERVS71-1P61550 626 aa8.5□□□□□ -1.05
TUBE1-201ENST00000368657 TNFAIP6P98066 277 aaPredicted RBP8.5□□□□□ -1.05
TUBE1-201ENST00000368657 GLO1Q04760 184 aa8.5□□□□□ -1.05
TUBE1-201ENST00000368657 ZNF718Q3SXZ3 478 aa8.5□□□□□ -1.05
TUBE1-201ENST00000368657 C6orf10Q5SRN2 563 aa8.5□□□□□ -1.05
TUBE1-201ENST00000368657 CD276Q5ZPR3 534 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms