RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 CCL3P10147 92 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 PAX7P23759 505 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 RPL18Q07020 188 aaKnown RBP7.81□□□□□ -1.16
TPM3-213ENST00000368545 SELENBP1Q13228 472 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 ITGADQ13349 1161 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 DCAF10Q5QP82 559 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 LCN1P1Q5VSP4 162 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 GPR139Q6DWJ6 353 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 PLBD1Q6P4A8 553 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 KLHL24Q6TFL4 600 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 MEPCEQ7L2J0 689 aaKnown RBP7.81□□□□□ -1.16
TPM3-213ENST00000368545 ANKRD13BQ86YJ7 626 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 SIRT6Q8N6T7 355 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 WDSUB1Q8N9V3 476 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 CLEC1AQ8NC01 280 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 PROKR2Q8NFJ6 384 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 OR1J4Q8NGS1 313 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 MFSD8Q8NHS3 518 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 SLC25A43Q8WUT9 341 aaPredicted RBP7.81□□□□□ -1.16
TPM3-213ENST00000368545 KATNB1Q9BVA0 655 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 FUNDC2Q9BWH2 189 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 EXOGQ9Y2C4 368 aaKnown RBP7.81□□□□□ -1.16
TPM3-213ENST00000368545 IER3IP1Q9Y5U9 82 aa7.81□□□□□ -1.16
TPM3-213ENST00000368545 TMEM129A0AVI4 362 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 UBE2QL1A1L167 161 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 FAM183AA6NL82 134 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 TXNDC12O95881 172 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 PTHP01270 115 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 LCKP06239 509 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 HIST1H1CP16403 213 aaKnown RBP7.8□□□□□ -1.16
TPM3-213ENST00000368545 GTF2E2P29084 291 aaKnown RBP7.8□□□□□ -1.16
TPM3-213ENST00000368545 AQP2P41181 271 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 CYB561P49447 251 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 CLK1P49759 484 aaKnown RBP7.8□□□□□ -1.16
TPM3-213ENST00000368545 DSCR4P56555 118 aaPredicted RBP7.8□□□□□ -1.16
TPM3-213ENST00000368545 LTBQ06643 244 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 CRMP1Q14194 572 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 ZNF362Q5T0B9 420 aaPredicted RBP7.8□□□□□ -1.16
TPM3-213ENST00000368545 SP5Q6BEB4 398 aaPredicted RBP7.8□□□□□ -1.16
TPM3-213ENST00000368545 FAM122BQ7Z309 247 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 P2RY8Q86VZ1 359 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 SCAIQ8N9R8 606 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 LRRC75AQ8NAA5 344 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 FAM98AQ8NCA5 519 aaKnown RBP7.8□□□□□ -1.16
TPM3-213ENST00000368545 SLC37A3Q8NCC5 494 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 OTULINQ96BN8 352 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 C12orf43Q96C57 262 aaKnown RBP7.8□□□□□ -1.16
TPM3-213ENST00000368545 TSC22D3Q99576 134 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 POTEKPQ9BYX7 375 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 YIPF3Q9GZM5 350 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 MRPL39Q9NYK5 338 aaKnown RBP7.8□□□□□ -1.16
TPM3-213ENST00000368545 HAO2Q9NYQ3 351 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 ENPP5Q9UJA9 477 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 FBXL2Q9UKC9 423 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 TP53TG5Q9Y2B4 290 aa7.8□□□□□ -1.16
TPM3-213ENST00000368545 H3BMQ9 156 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 FZD7O75084 574 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 GABARAPO95166 117 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 IGHMP01871 453 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 IGHA1P01876 353 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 LIFP15018 202 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 ZNF17P17021 662 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 SLC2A5P22732 501 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 ATP6V1E1P36543 226 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 UQCRFS1P47985 274 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 LOXL3P58215 753 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 LGALS3BPQ08380 585 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 MED22Q15528 200 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 SLC35D3Q5M8T2 416 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 ABHD17BQ5VST6 288 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 B3GNTL1Q67FW5 361 aaPredicted RBP7.79□□□□□ -1.16
TPM3-213ENST00000368545 MTFR2Q6P444 385 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 VASH2Q86V25 355 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 IGFN1Q86VF2 1251 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 BEST3Q8N1M1 668 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 NANOGP1Q8N7R0 232 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 SDR9C7Q8NEX9 313 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 BBS1Q8NFJ9 593 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 OR52E2Q8NGJ4 325 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 MOSPD2Q8NHP6 518 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 PSMF1Q92530 271 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 YIPF6Q96EC8 236 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 FAM210AQ96ND0 272 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 SPATA25Q9BR10 227 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 ZNF71Q9NQZ8 489 aaPredicted RBP7.79□□□□□ -1.16
TPM3-213ENST00000368545 KLHL1Q9NR64 748 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 PCDHB16Q9NRJ7 776 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 INPP5EQ9NRR6 644 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 ADAM18Q9Y3Q7 739 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 TEX13CA0A0J9YWL9 993 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 TRIM64BA6NI03 449 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 FTCDNL1E5RQL4 147 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 CBR3O75828 277 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 OR6A2O95222 327 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 GRPRP30550 384 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 IDUAP35475 653 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 FAM3BP58499 235 aaPredicted RBP7.79□□□□□ -1.16
TPM3-213ENST00000368545 RPS7P62081 194 aaKnown RBP7.79□□□□□ -1.16
TPM3-213ENST00000368545 ERVK-25P63136 954 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 SPHARQ15513 63 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms