RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 C3orf33Q6P1S2 294 aa12.39□□□□□ -0.43
SHC1-202ENST00000368445 OR8S1Q8NH09 359 aa12.39□□□□□ -0.43
SHC1-202ENST00000368445 ZMAT3Q9HA38 289 aaKnown RBP12.39□□□□□ -0.43
SHC1-202ENST00000368445 NXT1Q9UKK6 140 aaKnown RBP12.39□□□□□ -0.43
SHC1-202ENST00000368445 LRP12Q9Y561 859 aa12.39□□□□□ -0.43
SHC1-202ENST00000368445 IGKV1D-43A0A0B4J1Z2 117 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 AIPO00170 330 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 CCL3P10147 92 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 GDNFP39905 211 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 EGR3Q06889 387 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 FGD2Q7Z6J4 655 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 OIT3Q8WWZ8 545 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 ADAMTS14Q8WXS8 1223 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 PPIEQ9UNP9 301 aaKnown RBP12.38□□□□□ -0.43
SHC1-202ENST00000368445 FREM2Q5SZK8 3169 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 CENPBD1B2RD01 187 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 WNT11O96014 354 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 CLDN17P56750 224 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 MFGE8Q08431 387 aaPredicted RBP12.38□□□□□ -0.43
SHC1-202ENST00000368445 SLC22A10Q63ZE4 541 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 RAB11FIP2Q7L804 512 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 CHMP1BQ7LBR1 199 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 PRSS35Q8N3Z0 413 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 TMEM105Q8N8V8 129 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 OR52I2Q8NH67 350 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 FCAMRQ8WWV6 532 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 C4orf45Q96LM5 186 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 ING3Q9NXR8 418 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 LOXL2Q9Y4K0 774 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 HS3ST3B1Q9Y662 390 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 TRAV18A0A075B6X5 111 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 PMS2P1A4D2B8 440 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 HMX3A6NHT5 357 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 EFNA2O43921 213 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 NPIPB7O75200 414 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 SC5DO75845 299 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 WDPCPO95876 746 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 SLC6A9P48067 706 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 UBE2NLQ5JXB2 153 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 C5orf46Q6UWT4 87 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 YRDCQ86U90 279 aaKnown RBP12.38□□□□□ -0.43
SHC1-202ENST00000368445 GLB1L2Q8IW92 636 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 EXD3Q8N9H8 876 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 OR1J4Q8NGS1 313 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 OR6F1Q8NGZ6 308 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 ASB17Q8WXJ9 295 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 SLC7A6Q92536 515 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 HGDQ93099 445 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 MRGPRX4Q96LA9 322 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 ATG5Q9H1Y0 275 aa12.38□□□□□ -0.43
SHC1-202ENST00000368445 LIPT2A6NK58 231 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 ARSBP15848 533 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 KLK2P20151 261 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 RCVRNP35243 200 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 MNDAP41218 407 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 OR11G2Q8NGC1 345 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 RBM24Q9BX46 236 aaKnown RBP12.37□□□□□ -0.43
SHC1-202ENST00000368445 B3GALT5Q9Y2C3 310 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 RAMP1O60894 148 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 TMIGD3P0DMS9 266 aaPredicted RBP12.37□□□□□ -0.43
SHC1-202ENST00000368445 FGF5P12034 268 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 CDK2P24941 298 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 MSX1P28360 303 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 RFC3P40938 356 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 PLPPR5Q32ZL2 321 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 OR10K2Q6IF99 312 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 MRPL14Q6P1L8 145 aaKnown RBP12.37□□□□□ -0.43
SHC1-202ENST00000368445 MAML2Q8IZL2 1156 aaPredicted RBP12.37□□□□□ -0.43
SHC1-202ENST00000368445 OR52N5Q8NH56 324 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 OR14L1PQ8NHC6 308 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 MAP6Q96JE9 813 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 OR10A4Q9H209 315 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 TMEM165Q9HC07 324 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 OR5V1Q9UGF6 321 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 PCNX2A6NKB5 2137 aa12.37□□□□□ -0.43
SHC1-202ENST00000368445 TLX3O43711 291 aaPredicted RBP12.36□□□□□ -0.43
SHC1-202ENST00000368445 RLN1P04808 185 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 KIR3DL2P43630 455 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 PLCZ1Q86YW0 608 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 SLC7A5P1Q8MH63 180 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 LRRC18Q8N456 261 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 TEX19Q8NA77 164 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 CHST4Q8NCG5 386 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 ZNF519Q8TB69 540 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 C11orf40Q8WZ69 217 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 FAM46BQ96A09 425 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 ZNF486Q96H40 463 aaPredicted RBP12.36□□□□□ -0.43
SHC1-202ENST00000368445 STRADBQ9C0K7 418 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 ALKBH4Q9NXW9 302 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 TAS2R4Q9NYW5 299 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 ASH2LQ9UBL3 628 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 CAMK2AQ9UQM7 478 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 DOCK7Q96N67 2140 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 EML5Q05BV3 1969 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 IGLV1-36A0A0B4J1U3 117 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 NPIPA2E9PIF3 369 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 NPIPA3F8WFD2 350 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 IGHG1P01857 330 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 CSN2P05814 226 aa12.36□□□□□ -0.43
SHC1-202ENST00000368445 NAGAP17050 411 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms