RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 GLB1L2Q8IW92 636 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 PDZD9Q8IXQ8 264 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 ZNF440Q8IYI8 595 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 PM20D2Q8IYS1 436 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 DND1Q8IYX4 353 aaKnown RBP10.42□□□□□ -0.74
USF1-201ENST00000368019 CLEC18CQ8NCF0 446 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 OR2AK2Q8NG84 335 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 ZNF417Q8TAU3 575 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 GPR148Q8TDV2 347 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 LINC00052Q96N35 136 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 SEC22CQ9BRL7 303 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 ZPBPQ9BS86 351 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 SLC6A15Q9H2J7 730 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 APMAPQ9HDC9 416 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 NKIRAS2Q9NYR9 191 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 FLRT3Q9NZU0 649 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 ZNF69Q9UC07 566 aa10.42□□□□□ -0.74
USF1-201ENST00000368019 PRRC2CQ9Y520 2896 aaKnown RBP10.42□□□□□ -0.74
USF1-201ENST00000368019 RP1L1Q8IWN7 2480 aaPredicted RBP10.42□□□□□ -0.74
USF1-201ENST00000368019 SPTBN1Q01082 2364 aaKnown RBP10.41□□□□□ -0.74
USF1-201ENST00000368019 TEX15Q9BXT5 2789 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 TRBV5-7A0A0A0MS05 114 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 A0A0B4J203 849 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 MPTX1A8MV57 137 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 LDB3O75112 727 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 RBBP9O75884 186 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 GPR75O95800 540 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 HIST1H1CP16403 213 aaKnown RBP10.41□□□□□ -0.74
USF1-201ENST00000368019 SPI1P17947 270 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 ATF4P18848 351 aaPredicted RBP10.41□□□□□ -0.74
USF1-201ENST00000368019 FUT1P19526 365 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 CASRP41180 1078 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 RPS4XP62701 263 aaKnown RBP10.41□□□□□ -0.74
USF1-201ENST00000368019 FOXK1P85037 733 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 MGAT2Q10469 447 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 ALKBH1Q13686 389 aaKnown RBP10.41□□□□□ -0.74
USF1-201ENST00000368019 RUNX2Q13950 521 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 ALG10BQ5I7T1 473 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 EMC4Q5J8M3 183 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 HES5Q5TA89 166 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 OR5M10Q6IEU7 315 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 LPCAT3Q6P1A2 487 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 ESPNLQ6ZVH7 1005 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 ZNF227Q86WZ6 799 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 CYB561A3Q8NBI2 242 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 NPEPL1Q8NDH3 523 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 OR10Z1Q8NGY1 313 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 OR51A7Q8NH64 312 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 CCDC107Q8WV48 283 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 ZMYND19Q96E35 227 aaPredicted RBP10.41□□□□□ -0.74
USF1-201ENST00000368019 OR2A5Q96R48 311 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 C1orf198Q9H425 327 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 TCF7L1Q9HCS4 588 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 ADAP2Q9NPF8 381 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 ZC4H2Q9NQZ6 224 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 CA10Q9NS85 328 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 DNAJB12Q9NXW2 375 aaKnown RBP10.41□□□□□ -0.74
USF1-201ENST00000368019 SPHK1Q9NYA1 384 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 UPB1Q9UBR1 384 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 GNG8Q9UK08 70 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 FLVCR2Q9UPI3 526 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 ZNF337Q9Y3M9 751 aa10.41□□□□□ -0.74
USF1-201ENST00000368019 A0A087WUJ7 227 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 A0A0D9SG52 128 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 KIR2DS5A0A0G2JLQ3 304 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 A0A0G2JNG1 304 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 SLC22A23A1A5C7 686 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 BLACEA4D250 179 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 ACOD1A6NK06 481 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 RFPL4AA6NLU0 287 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 OR5K4A6NMS3 321 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 RFPL4AL1F8VTS6 287 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 NPIPB9F8W1W9 429 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 KIR2DS3K7RE56 304 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 PEX12O00623 359 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 ABCD4O14678 606 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 ZNF254O75437 659 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 STK17BO94768 372 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 TOXO94900 526 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 TXNDC12O95881 172 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 AKAIN1P0CW23 69 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 MGMTP16455 207 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 UBE2IP63279 158 aaKnown RBP10.4□□□□□ -0.74
USF1-201ENST00000368019 EGR3Q06889 387 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 FGL1Q08830 312 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 ZNF345Q14585 488 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 KIR2DS5Q14953 304 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 TUSC1Q2TAM9 212 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 TRMT12Q53H54 448 aaKnown RBP10.4□□□□□ -0.74
USF1-201ENST00000368019 LINC01590Q5TEZ4 76 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 FDX2Q6P4F2 183 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 LRRTM1Q86UE6 522 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 MCATQ8IVS2 390 aaKnown RBP10.4□□□□□ -0.74
USF1-201ENST00000368019 KCT2Q8NC54 265 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 SDR9C7Q8NEX9 313 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 OR4E2Q8NGC2 313 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 OR52H1Q8NGJ2 320 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 OR4K13Q8NH42 304 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 FLVCR1-AS1Q8TAF5 88 aa10.4□□□□□ -0.74
USF1-201ENST00000368019 RGP1Q92546 391 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms