RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 SMCO4Q9NRQ5 59 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 PCYT1BQ9Y5K3 369 aaPredicted RBP6.63□□□□□ -1.35
VTA1-202ENST00000367630 ARPC5O15511 151 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 S100A2P29034 98 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 GPR157Q5UAW9 335 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 SLC35D2Q76EJ3 337 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 OVCH2Q7RTZ1 564 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 PIK3IP1Q96FE7 263 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 C4orf45Q96LM5 186 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 MCCC2Q9HCC0 563 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 GALNT9Q9HCQ5 603 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 SDHAF2Q9NX18 166 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 USP36Q9P275 1121 aaKnown RBP6.63□□□□□ -1.35
VTA1-202ENST00000367630 SLC22A13Q9Y226 551 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 ISG15P05161 165 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 ZNF17P17021 662 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 MSR1P21757 451 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 CD1CP29017 333 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 P2RX3P56373 397 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 CXADRP78310 365 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 TLE4Q04727 773 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 SHHQ15465 462 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 LIPNQ5VXI9 398 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 FAM111BQ6SJ93 734 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 NEK7Q8TDX7 302 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 C3orf49Q96BT1 292 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 SEC22CQ9BRL7 303 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 SF3B5Q9BWJ5 86 aaKnown RBP6.63□□□□□ -1.35
VTA1-202ENST00000367630 TBC1D29Q9UFV1 150 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 TMA7Q9Y2S6 64 aaKnown RBP6.63□□□□□ -1.35
VTA1-202ENST00000367630 SF3B6Q9Y3B4 125 aaKnown RBP6.63□□□□□ -1.35
VTA1-202ENST00000367630 TTC3P53804 2025 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 TSPAN15O95858 294 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 DDAH2O95865 285 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 AQP2P41181 271 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 SLC6A9P48067 706 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 TPMTP51580 245 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 LSM6P62312 80 aaKnown RBP6.63□□□□□ -1.35
VTA1-202ENST00000367630 LAIR2Q6ISS4 152 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 LRFN4Q6PJG9 635 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 SSX8Q7RTT4 187 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 TIPARPQ7Z3E1 657 aaKnown RBP6.63□□□□□ -1.35
VTA1-202ENST00000367630 GALNT16Q8N428 558 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 OR1N1Q8NGS0 311 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 FAM216AQ8WUB2 273 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 UPRTQ96BW1 309 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 ARL5BQ96KC2 179 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 NMNAT3Q96T66 252 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 KCNIP1Q9NZI2 227 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 CXXC1Q9P0U4 656 aaPredicted RBP6.63□□□□□ -1.35
VTA1-202ENST00000367630 B9D1Q9UPM9 204 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 FARSAQ9Y285 508 aaKnown RBP6.63□□□□□ -1.35
VTA1-202ENST00000367630 TMEM72A0PK05 275 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 ZNF860A6NHJ4 632 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 ALOX12BO75342 701 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 CNR1P21554 472 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 AFF3P51826 1226 aaKnown RBP6.63□□□□□ -1.35
VTA1-202ENST00000367630 ID2Q02363 134 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 AANATQ16613 207 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 PRTGQ2VWP7 1150 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 ARSKQ6UWY0 536 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 ATG4DQ86TL0 474 aaPredicted RBP6.63□□□□□ -1.35
VTA1-202ENST00000367630 YIPF5Q969M3 257 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 RNF32Q9H0A6 362 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 BCO1Q9HAY6 547 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 DLL4Q9NR61 685 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 TAS2R16Q9NYV7 291 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 B3GAT1Q9P2W7 334 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 ST6GALNAC2Q9UJ37 374 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 LAMP3Q9UQV4 416 aa6.63□□□□□ -1.35
VTA1-202ENST00000367630 CTSVO60911 334 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 LDB3O75112 727 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 MMP9P14780 707 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 MAKP20794 623 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 IGFBP6P24592 240 aaPredicted RBP6.62□□□□□ -1.35
VTA1-202ENST00000367630 CTGFP29279 349 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 EVI2BP34910 448 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 S100A10P60903 97 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 GXYLT1Q4G148 440 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 RPS19BP1Q86WX3 136 aaKnown RBP6.62□□□□□ -1.35
VTA1-202ENST00000367630 CCDC71Q8IV32 467 aaPredicted RBP6.62□□□□□ -1.35
VTA1-202ENST00000367630 LINC01555Q8NAE3 123 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 ZSCAN4Q8NAM6 433 aaPredicted RBP6.62□□□□□ -1.35
VTA1-202ENST00000367630 C2orf50Q96LR7 162 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 SOSTQ9BQB4 213 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 IL21RQ9HBE5 538 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 VDAC3Q9Y277 283 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 SLC33A1O00400 549 aaPredicted RBP6.62□□□□□ -1.35
VTA1-202ENST00000367630 IGLV3-19P01714 112 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 FCGR2AP12318 317 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 CCR2P41597 374 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 ROM1Q03395 351 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 ZNF85Q03923 595 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 RPS4Y2Q8TD47 263 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 ASB5Q8WWX0 329 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 VSTM2LQ96N03 204 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 ZNF416Q9BWM5 594 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 PLA2G12AQ9BZM1 189 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 AUNIPQ9H7T9 357 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 SLC2A8Q9NY64 477 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms