RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 SOHLH1Q5JUK2 328 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 OR7E24Q6IFN5 339 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 CNTN4Q8IWV2 1026 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 FRMD1Q8N878 549 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 OR8J3Q8NGG0 315 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 FCRL1Q96LA6 429 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 ZIC5Q96T25 663 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF286AQ9HBT8 521 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 KPTNQ9Y664 436 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 A0A0B4J2A0 478 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 A0A1W2PPV4 95 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 LOC390937A0A1W2PQ73 354 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 C2CD4BA6NLJ0 364 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 LMO7DNF2Z398 122 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 VAMP5O95183 116 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 CSRP1P21291 193 aaKnown RBP7.95□□□□□ -1.14
SYNE1-206ENST00000367253 MMP12P39900 470 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 MBTPS1Q14703 1052 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 SSPNQ14714 243 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 PHYHD1Q5SRE7 291 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 PM20D1Q6GTS8 502 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 SUSD1Q6UWL2 747 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 NDUFAF7Q7L592 441 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 PDZD3Q86UT5 571 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 RBM45Q8IUH3 476 aaKnown RBP7.95□□□□□ -1.14
SYNE1-206ENST00000367253 KLHDC8AQ8IYD2 350 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 OR13H1Q8NG92 308 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 LINC01599Q8WXQ3 324 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 MCHR1Q99705 422 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 TMEM208Q9BTX3 173 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 COL25A1Q9BXS0 654 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-206ENST00000367253 GNB4Q9HAV0 340 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 SIDT1Q9NXL6 827 aaKnown RBP7.95□□□□□ -1.14
SYNE1-206ENST00000367253 DOK5Q9P104 306 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 SHPKQ9UHJ6 478 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 EXO1Q9UQ84 846 aaKnown RBP7.95□□□□□ -1.14
SYNE1-206ENST00000367253 TMEM233B4DJY2 109 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 PPM1DO15297 605 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 HPGDSO60760 199 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 GPR32O75388 356 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 CST3P01034 146 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-206ENST00000367253 EBLN1P0CF75 366 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 MGST1P10620 155 aaKnown RBP7.95□□□□□ -1.14
SYNE1-206ENST00000367253 EPHA8P29322 1005 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-206ENST00000367253 CEACAM3P40198 252 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 CFHR1Q03591 330 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 OPCMLQ14982 345 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF658BQ4V348 819 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-206ENST00000367253 OR4C11Q6IEV9 310 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF441Q8N8Z8 693 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 RELL2Q8NC24 303 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-206ENST00000367253 CRYGNQ8WXF5 182 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 UPRTQ96BW1 309 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 NKX3-1Q99801 234 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-206ENST00000367253 INIPQ9NRY2 104 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 CNIH4Q9P003 139 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 RHCGQ9UBD6 479 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 A0A0A6YYJ9 748 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 H0Y8X5 98 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 TGFB1I1O43294 461 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 FZD7O75084 574 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 HBE1P02100 147 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 CHRM4P08173 479 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 SERPINA2P20848 420 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 AK4P27144 223 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-206ENST00000367253 MDH2P40926 338 aaKnown RBP7.95□□□□□ -1.14
SYNE1-206ENST00000367253 CSNK1DP48730 415 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 SELPLGQ14242 412 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 TMEM150AQ86TG1 271 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF695Q8IW36 515 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 KLHDC8BQ8IXV7 354 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 CISD2Q8N5K1 135 aaKnown RBP7.95□□□□□ -1.14
SYNE1-206ENST00000367253 RHEBL1Q8TAI7 183 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 SLC25A31Q9H0C2 315 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 GNG12Q9UBI6 72 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 GAB2Q9UQC2 676 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 VDAC3Q9Y277 283 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 MYH8P13535 1937 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 ABHD16AO95870 558 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 KNG1P01042 644 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 CXCL10P02778 98 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 FCARP24071 287 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 SLC35B1P78383 322 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 OR2T2Q6IF00 324 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 SLC36A1Q7Z2H8 476 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 UMODL1-AS1Q8N2C9 162 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 ZFP62Q8NB50 900 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-206ENST00000367253 OR51Q1Q8NH59 317 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 GPR119Q8TDV5 335 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF681Q96N22 645 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 C1orf43Q9BWL3 253 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 FAM212BQ9NTI7 297 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-206ENST00000367253 TBC1D29Q9UFV1 150 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 NUMA1Q14980 2115 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 MEGF11A6BM72 1044 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 ALPLP05186 524 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 NKX3-2P78367 333 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 LCN10Q6JVE6 187 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 PAQR3Q6TCH7 311 aa7.94□□□□□ -1.14
SYNE1-206ENST00000367253 DHRS11Q6UWP2 260 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms