RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 FGFR1OP2Q9NVK5 253 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 CAPN7Q9Y6W3 813 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 ELOVL7A1L3X0 281 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 C5orf49A4QMS7 147 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 CDC14BO60729 498 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 PNPP00491 289 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 ZNF32P17041 273 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 CDAP32320 146 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 ZNF81P51508 661 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 ARHGDIAP52565 204 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 ERVS71-1P61550 626 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 SLC3A1Q07837 685 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 HFEQ30201 348 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 FAM27BQ5VT28 67 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 ACSM5Q6NUN0 579 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 ARL9Q6T311 187 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 MICU2Q8IYU8 434 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 OFCC1Q8IZS5 231 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 ZFAND2BQ8WV99 257 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 NSMAFQ92636 917 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 RAB1CQ92928 201 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 NABP1Q96AH0 204 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 LRRC37BQ96QE4 947 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 TSPAN32Q96QS1 320 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 FNDC11Q9BVV2 318 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 EGLN1Q9GZT9 426 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 OCEL1Q9H607 264 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 METTL17Q9H7H0 456 aaPredicted RBP12.66□□□□□ -0.38
CTSD-202ENST00000367196 ELOVL3Q9HB03 270 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 LPAR2Q9HBW0 351 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 TREM2Q9NZC2 230 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 UGT2A1Q9Y4X1 527 aa12.66□□□□□ -0.38
CTSD-202ENST00000367196 LOC100653049A0A140TA62 436 aa12.65□□□□□ -0.38
CTSD-202ENST00000367196 FAM157AC9JC47 383 aa12.65□□□□□ -0.38
CTSD-202ENST00000367196 KRT34O76011 436 aa12.65□□□□□ -0.38
CTSD-202ENST00000367196 CST2P09228 141 aa12.65□□□□□ -0.38
CTSD-202ENST00000367196 ITGA2P17301 1181 aa12.65□□□□□ -0.38
CTSD-202ENST00000367196 SLC9A3P48764 834 aa12.65□□□□□ -0.38
CTSD-202ENST00000367196 SRSF2Q01130 221 aaKnown RBP12.65□□□□□ -0.38
CTSD-202ENST00000367196 FMODQ06828 376 aa12.65□□□□□ -0.38
CTSD-202ENST00000367196 LAPTM4AQ15012 233 aa12.65□□□□□ -0.38
CTSD-202ENST00000367196 TRAM2Q15035 370 aa12.65□□□□□ -0.38
CTSD-202ENST00000367196 MBNL2Q5VZF2 373 aaKnown RBP12.65□□□□□ -0.38
CTSD-202ENST00000367196 USP51Q70EK9 711 aa12.65□□□□□ -0.38
CTSD-202ENST00000367196 RNF113BQ8IZP6 322 aaKnown RBP12.65□□□□□ -0.38
CTSD-202ENST00000367196 ZNF418Q8TF45 676 aaPredicted RBP12.65□□□□□ -0.38
CTSD-202ENST00000367196 GEMIN6Q8WXD5 167 aaKnown RBP12.65□□□□□ -0.38
CTSD-202ENST00000367196 NMD3Q96D46 503 aaKnown RBP12.65□□□□□ -0.38
CTSD-202ENST00000367196 POM121L2Q96KW2 1035 aa12.65□□□□□ -0.38
CTSD-202ENST00000367196 DIRC2Q96SL1 478 aa12.65□□□□□ -0.38
CTSD-202ENST00000367196 ZNF665Q9H7R5 613 aa12.65□□□□□ -0.38
CTSD-202ENST00000367196 NDRG4Q9ULP0 352 aaKnown RBP12.65□□□□□ -0.38
CTSD-202ENST00000367196 A4GNTQ9UNA3 340 aa12.65□□□□□ -0.38
CTSD-202ENST00000367196 TIMM10BQ9Y5J6 103 aa12.65□□□□□ -0.38
CTSD-202ENST00000367196 A0A0G2JMP0 313 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 A0A0X1KG70 313 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 C12orf71A8MTZ7 269 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 EFCAB9A8MZ26 197 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 NDUFAB1O14561 156 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 GSTA4O15217 222 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 PIP5K1CO60331 668 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 ICMTO60725 284 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 MSR1P21757 451 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 CTXN1P60606 82 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 LMO4P61968 165 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 ERVK-25P63136 954 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 PSG4Q00888 419 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 GLO1Q04760 184 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 TSTQ16762 297 aaKnown RBP12.64□□□□□ -0.39
CTSD-202ENST00000367196 FAHD2BQ6P2I3 314 aaPredicted RBP12.64□□□□□ -0.39
CTSD-202ENST00000367196 SLC25A47Q6Q0C1 308 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 RRM2BQ7LG56 351 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 ZER1Q7Z7L7 766 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 SYT9Q86SS6 491 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 PEG10Q86TG7 708 aaKnown RBP12.64□□□□□ -0.39
CTSD-202ENST00000367196 OAFQ86UD1 273 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 CYP4Z1Q86W10 505 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 MEX3DQ86XN8 651 aaKnown RBP12.64□□□□□ -0.39
CTSD-202ENST00000367196 NRMQ8IXM6 262 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 OR4M2Q8NGB6 313 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 RP9Q8TA86 221 aaKnown RBP12.64□□□□□ -0.39
CTSD-202ENST00000367196 ABHD4Q8TB40 342 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 FAHD2AQ96GK7 314 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 OR2H1Q9GZK4 316 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 ZDHHC8Q9ULC8 765 aa12.64□□□□□ -0.39
CTSD-202ENST00000367196 TRAV27A0A087WT01 109 aa12.63□□□□□ -0.39
CTSD-202ENST00000367196 A0A1W2PPL8 197 aa12.63□□□□□ -0.39
CTSD-202ENST00000367196 XKRYO14609 159 aa12.63□□□□□ -0.39
CTSD-202ENST00000367196 GSTM3P21266 225 aa12.63□□□□□ -0.39
CTSD-202ENST00000367196 TUBG1P23258 451 aa12.63□□□□□ -0.39
CTSD-202ENST00000367196 GATA3P23771 443 aa12.63□□□□□ -0.39
CTSD-202ENST00000367196 LAP3P28838 519 aa12.63□□□□□ -0.39
CTSD-202ENST00000367196 WNT5AP41221 380 aa12.63□□□□□ -0.39
CTSD-202ENST00000367196 MMP15P51511 669 aa12.63□□□□□ -0.39
CTSD-202ENST00000367196 MVKQ03426 396 aa12.63□□□□□ -0.39
CTSD-202ENST00000367196 PRKCDQ05655 676 aa12.63□□□□□ -0.39
CTSD-202ENST00000367196 SCRN3Q0VDG4 424 aa12.63□□□□□ -0.39
CTSD-202ENST00000367196 IFI44LQ53G44 452 aa12.63□□□□□ -0.39
CTSD-202ENST00000367196 FOXL2NBQ6ZUU3 175 aa12.63□□□□□ -0.39
CTSD-202ENST00000367196 ZNF101Q8IZC7 436 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms