RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 GAAP10253 952 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 DCKP27707 260 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 CEACAM8P31997 349 aaPredicted RBP18.19■□□□□ 0.5
SHISA4-201ENST00000362011 ROR2Q01974 943 aaKnown RBP18.19■□□□□ 0.5
SHISA4-201ENST00000362011 STK11Q15831 433 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 LINGO2Q7L985 606 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 SLC16A9Q7RTY1 509 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 ABHD12BQ7Z5M8 362 aaPredicted RBP18.19■□□□□ 0.5
SHISA4-201ENST00000362011 SLC35F2Q8IXU6 374 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 TIGD4Q8IY51 512 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 SLC26A10Q8NG04 563 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 SIGLEC11Q96RL6 698 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 SEC61A2Q9H9S3 476 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 CRLF2Q9HC73 371 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 PRSS50Q9UI38 385 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 COMMD3-BMI1R4GMX3 469 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 ZNF587BE7ETH6 402 aa18.18■□□□□ 0.5
SHISA4-201ENST00000362011 SMIM18P0DKX4 95 aa18.18■□□□□ 0.5
SHISA4-201ENST00000362011 ZNF823P16415 610 aa18.18■□□□□ 0.5
SHISA4-201ENST00000362011 GUCA1AP43080 201 aaPredicted RBP18.18■□□□□ 0.5
SHISA4-201ENST00000362011 MVKQ03426 396 aa18.18■□□□□ 0.5
SHISA4-201ENST00000362011 FOXF2Q12947 444 aa18.18■□□□□ 0.5
SHISA4-201ENST00000362011 CEACAM16Q2WEN9 425 aa18.18■□□□□ 0.5
SHISA4-201ENST00000362011 VWA1Q6PCB0 445 aa18.18■□□□□ 0.5
SHISA4-201ENST00000362011 TFAP2EQ6VUC0 442 aa18.18■□□□□ 0.5
SHISA4-201ENST00000362011 FOXL2NBQ6ZUU3 175 aa18.18■□□□□ 0.5
SHISA4-201ENST00000362011 UBE2J2Q8N2K1 259 aa18.18■□□□□ 0.5
SHISA4-201ENST00000362011 SVOPQ8N4V2 548 aa18.18■□□□□ 0.5
SHISA4-201ENST00000362011 OR10H5Q8NGA6 315 aa18.18■□□□□ 0.5
SHISA4-201ENST00000362011 OR6N2Q8NGY6 317 aa18.18■□□□□ 0.5
SHISA4-201ENST00000362011 MRPS26Q9BYN8 205 aaKnown RBP18.18■□□□□ 0.5
SHISA4-201ENST00000362011 MRPL22Q9NWU5 206 aaKnown RBP18.18■□□□□ 0.5
SHISA4-201ENST00000362011 EXOSC1Q9Y3B2 195 aaKnown RBP18.18■□□□□ 0.5
SHISA4-201ENST00000362011 UGT2A1Q9Y4X1 527 aa18.18■□□□□ 0.5
SHISA4-201ENST00000362011 TRGV8A0A0C4DH27 118 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 RPL36A-HNRNPH2H7BZ11 118 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 J3QRE1 110 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 IGHA1P01876 353 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 TFP02787 698 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 HRGP04196 525 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 MYL12AP19105 171 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 C21orf33P30042 268 aaPredicted RBP18.17■□□□□ 0.5
SHISA4-201ENST00000362011 CDAP32320 146 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 CA7P43166 264 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 ENTPD1P49961 510 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 ACTC1P68032 377 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 ACTA1P68133 377 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 ADAM8P78325 824 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 FBXW9Q5XUX1 488 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 TMEM211Q6ICI0 200 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.17■□□□□ 0.5
SHISA4-201ENST00000362011 ACBD7Q8N6N7 88 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 OR10H4Q8NGA5 316 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 C11orf40Q8WZ69 217 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 JAM3Q9BX67 310 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 YIPF3Q9GZM5 350 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 WDR76Q9H967 626 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 INPP5EQ9NRR6 644 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 SCOCQ9UIL1 159 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 PROCRQ9UNN8 238 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 LRBAP50851 2863 aa18.17■□□□□ 0.5
SHISA4-201ENST00000362011 C12orf71A8MTZ7 269 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 E9PLN8 166 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 TNFSF13O75888 250 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 MPZL1O95297 269 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 ADRA2AP08913 450 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 OR2T7P0C7T2 308 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 ATP6V1B1P15313 513 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 CTSSP25774 331 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 PMPCAQ10713 525 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 FAPQ12884 760 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 KCNMB1Q16558 191 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 MEP1BQ16820 701 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 BTLAQ7Z6A9 289 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 SPARTQ8N0X7 666 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 NAXEQ8NCW5 288 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 OR2T27Q8NH04 317 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 ZNF837Q96EG3 531 aaPredicted RBP18.16■□□□□ 0.5
SHISA4-201ENST00000362011 MNTQ99583 582 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 TBX5Q99593 518 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 FOXB1Q99853 325 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 VKORC1Q9BQB6 163 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 SFXN3Q9BWM7 321 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 CDCA4Q9BXL8 241 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 NELFAQ9H3P2 528 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 POLE4Q9NR33 117 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 PLSCR4Q9NRQ2 329 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 CHCHD3Q9NX63 227 aaKnown RBP18.16■□□□□ 0.5
SHISA4-201ENST00000362011 MALT1Q9UDY8 824 aa18.16■□□□□ 0.5
SHISA4-201ENST00000362011 ABCA12Q86UK0 2595 aa18.15■□□□□ 0.5
SHISA4-201ENST00000362011 TRIM64CA6NLI5 447 aa18.15■□□□□ 0.5
SHISA4-201ENST00000362011 HSPB2A8KAH6 182 aa18.15■□□□□ 0.5
SHISA4-201ENST00000362011 ZNF670-ZNF695F2Z2N8 137 aa18.15■□□□□ 0.5
SHISA4-201ENST00000362011 ZNF593O00488 134 aaPredicted RBP18.15■□□□□ 0.5
SHISA4-201ENST00000362011 SPARCP09486 303 aa18.15■□□□□ 0.5
SHISA4-201ENST00000362011 NPR2P20594 1047 aa18.15■□□□□ 0.5
SHISA4-201ENST00000362011 MSR1P21757 451 aa18.15■□□□□ 0.5
SHISA4-201ENST00000362011 TUBA4AP68366 448 aa18.15■□□□□ 0.5
SHISA4-201ENST00000362011 MRPS34P82930 218 aaKnown RBP18.15■□□□□ 0.5
SHISA4-201ENST00000362011 IRF3Q14653 427 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms