RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 C19orf25Q9UFG5 118 aaPredicted RBP20.3■□□□□ 0.84
LDB1-201ENST00000361198 D6RAR5 112 aa20.29■□□□□ 0.84
LDB1-201ENST00000361198 MS4A18H0YCH9 400 aa20.29■□□□□ 0.84
LDB1-201ENST00000361198 SOX2P48431 317 aa20.29■□□□□ 0.84
LDB1-201ENST00000361198 MRPS10P82664 201 aaKnown RBP20.29■□□□□ 0.84
LDB1-201ENST00000361198 PUDPQ08623 228 aa20.29■□□□□ 0.84
LDB1-201ENST00000361198 MS4A18Q3C1V0 323 aa20.29■□□□□ 0.84
LDB1-201ENST00000361198 TMEM255AQ5JRV8 349 aa20.29■□□□□ 0.84
LDB1-201ENST00000361198 STAC2Q6ZMT1 411 aa20.29■□□□□ 0.84
LDB1-201ENST00000361198 OR5V1Q9UGF6 321 aa20.29■□□□□ 0.84
LDB1-201ENST00000361198 AUP1Q9Y679 476 aa20.29■□□□□ 0.84
LDB1-201ENST00000361198 OR4C45A6NMZ5 311 aa20.29■□□□□ 0.84
LDB1-201ENST00000361198 SSNA1O43805 119 aa20.29■□□□□ 0.84
LDB1-201ENST00000361198 KRT33AO76009 404 aa20.29■□□□□ 0.84
LDB1-201ENST00000361198 MNDAP41218 407 aa20.29■□□□□ 0.84
LDB1-201ENST00000361198 PTGDSP41222 190 aa20.29■□□□□ 0.84
LDB1-201ENST00000361198 SFRP4Q6FHJ7 346 aaPredicted RBP20.29■□□□□ 0.84
LDB1-201ENST00000361198 LRRN1Q6UXK5 716 aa20.29■□□□□ 0.84
LDB1-201ENST00000361198 ATOH1Q92858 354 aaPredicted RBP20.29■□□□□ 0.84
LDB1-201ENST00000361198 S100A16Q96FQ6 103 aaKnown RBP20.29■□□□□ 0.84
LDB1-201ENST00000361198 MED30Q96HR3 178 aa20.29■□□□□ 0.84
LDB1-201ENST00000361198 FOXJ3Q9UPW0 622 aa20.29■□□□□ 0.84
LDB1-201ENST00000361198 PHYHO14832 338 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 DNASE1P24855 282 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 CCKBRP32239 447 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 IL11RAQ14626 422 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 TRIM61Q5EBN2 209 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 C1orf210Q8IVY1 113 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 PRSS35Q8N3Z0 413 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 MFSD8Q8NHS3 518 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 FCAMRQ8WWV6 532 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 HAVCR1Q96D42 359 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 PPP4R1LQ9P1A2 415 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 TECTAO75443 2155 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 TRBV5-5A0A0J9YX44 114 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 G3V3Q6 166 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 MAPK3P27361 379 aaPredicted RBP20.28■□□□□ 0.84
LDB1-201ENST00000361198 DLX5P56178 289 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 INPP5JQ15735 1006 aaPredicted RBP20.28■□□□□ 0.84
LDB1-201ENST00000361198 MEP1BQ16820 701 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 ODF4Q2M2E3 257 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 STPG1Q5TH74 334 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 ZNF248Q8NDW4 579 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 OR10AC1Q8NH08 325 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 OR6S1Q8NH40 331 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 SYNPRQ8TBG9 265 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 GCDHQ92947 438 aaPredicted RBP20.28■□□□□ 0.84
LDB1-201ENST00000361198 MARVELD3Q96A59 401 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 ZNF436Q9C0F3 470 aaPredicted RBP20.28■□□□□ 0.84
LDB1-201ENST00000361198 NKIRAS2Q9NYR9 191 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 MRPL15Q9P015 296 aaKnown RBP20.28■□□□□ 0.84
LDB1-201ENST00000361198 KLK11Q9UBX7 282 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 FBXL3Q9UKT7 428 aa20.28■□□□□ 0.84
LDB1-201ENST00000361198 A0A1B0GUH1 482 aa20.27■□□□□ 0.84
LDB1-201ENST00000361198 A0A1W2PQ72 361 aa20.27■□□□□ 0.84
LDB1-201ENST00000361198 ANKRD20A5PA0PJZ0 165 aa20.27■□□□□ 0.84
LDB1-201ENST00000361198 H3BML4 177 aa20.27■□□□□ 0.84
LDB1-201ENST00000361198 NTN3O00634 580 aaPredicted RBP20.27■□□□□ 0.84
LDB1-201ENST00000361198 EFNA2O43921 213 aa20.27■□□□□ 0.84
LDB1-201ENST00000361198 TPPPO94811 219 aa20.27■□□□□ 0.84
LDB1-201ENST00000361198 SDHBP21912 280 aa20.27■□□□□ 0.84
LDB1-201ENST00000361198 CLDN12P56749 244 aa20.27■□□□□ 0.84
LDB1-201ENST00000361198 OLFML2AQ68BL7 652 aa20.27■□□□□ 0.84
LDB1-201ENST00000361198 BPHLQ86WA6 291 aaPredicted RBP20.27■□□□□ 0.84
LDB1-201ENST00000361198 OR51A4Q8NGJ6 313 aa20.27■□□□□ 0.84
LDB1-201ENST00000361198 MIB2Q96AX9 1013 aa20.27■□□□□ 0.84
LDB1-201ENST00000361198 DACT3Q96B18 629 aaPredicted RBP20.27■□□□□ 0.84
LDB1-201ENST00000361198 OR8B4Q96RC9 309 aa20.27■□□□□ 0.84
LDB1-201ENST00000361198 ELOVL3Q9HB03 270 aa20.27■□□□□ 0.84
LDB1-201ENST00000361198 NPDC1Q9NQX5 325 aaPredicted RBP20.27■□□□□ 0.84
LDB1-201ENST00000361198 FLVCR2Q9UPI3 526 aa20.27■□□□□ 0.84
LDB1-201ENST00000361198 ETV7Q9Y603 341 aa20.27■□□□□ 0.84
LDB1-201ENST00000361198 H3BSH0 61 aa20.27■□□□□ 0.83
LDB1-201ENST00000361198 SPARCP09486 303 aa20.27■□□□□ 0.83
LDB1-201ENST00000361198 CCL4P13236 92 aa20.27■□□□□ 0.83
LDB1-201ENST00000361198 METTL11BQ5VVY1 283 aa20.27■□□□□ 0.83
LDB1-201ENST00000361198 H1FNTQ75WM6 255 aaPredicted RBP20.27■□□□□ 0.83
LDB1-201ENST00000361198 SERPINA12Q8IW75 414 aa20.27■□□□□ 0.83
LDB1-201ENST00000361198 WDFY1Q8IWB7 410 aa20.27■□□□□ 0.83
LDB1-201ENST00000361198 ZNF676Q8N7Q3 588 aa20.27■□□□□ 0.83
LDB1-201ENST00000361198 DEFB126Q9BYW3 111 aa20.27■□□□□ 0.83
LDB1-201ENST00000361198 METTL7AQ9H8H3 244 aa20.27■□□□□ 0.83
LDB1-201ENST00000361198 TCF7L1Q9HCS4 588 aa20.27■□□□□ 0.83
LDB1-201ENST00000361198 ZNF208O43345 1280 aa20.26■□□□□ 0.83
LDB1-201ENST00000361198 ADRA2CP18825 462 aa20.26■□□□□ 0.83
LDB1-201ENST00000361198 ADAM8P78325 824 aa20.26■□□□□ 0.83
LDB1-201ENST00000361198 KIF26BQ2KJY2 2108 aa20.26■□□□□ 0.83
LDB1-201ENST00000361198 TMEM69Q5SWH9 247 aa20.26■□□□□ 0.83
LDB1-201ENST00000361198 DNM1P46Q6ZS02 220 aa20.26■□□□□ 0.83
LDB1-201ENST00000361198 C15orf40Q8WUR7 153 aa20.26■□□□□ 0.83
LDB1-201ENST00000361198 DDIT4LQ96D03 193 aa20.26■□□□□ 0.83
LDB1-201ENST00000361198 ZC3H10Q96K80 434 aaKnown RBP20.26■□□□□ 0.83
LDB1-201ENST00000361198 DCBLD2Q96PD2 775 aa20.26■□□□□ 0.83
LDB1-201ENST00000361198 RASL10BQ96S79 203 aa20.26■□□□□ 0.83
LDB1-201ENST00000361198 ULBP3Q9BZM4 244 aa20.26■□□□□ 0.83
LDB1-201ENST00000361198 SLITRK2Q9H156 845 aa20.26■□□□□ 0.83
LDB1-201ENST00000361198 BEX1Q9HBH7 125 aa20.26■□□□□ 0.83
LDB1-201ENST00000361198 WIF1Q9Y5W5 379 aa20.26■□□□□ 0.83
LDB1-201ENST00000361198 TMEM212A6NML5 194 aa20.25■□□□□ 0.83
LDB1-201ENST00000361198 ETV2O00321 342 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms