RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 NAXDQ8IW45 347 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 PPP1R1CQ8WVI7 109 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 LHX4Q969G2 390 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 RNASEK-C17orf49H0YIS7 233 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 PRAMEF4O60810 478 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 SOD1P00441 154 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 USF1P22415 310 aaPredicted RBP12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 DUSP3P51452 185 aaPredicted RBP12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 ZNF92Q03936 586 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 SLC17A1Q14916 467 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 CTF1Q16619 201 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 XKR7Q5GH72 579 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 OR52B4Q8NGK2 314 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 CMBLQ96DG6 245 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 CPEB1Q9BZB8 566 aaKnown RBP12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 GLIPR2Q9H4G4 154 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 MOB1AQ9H8S9 216 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 PLEKHF2Q9H8W4 249 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 MCTS1Q9ULC4 181 aaKnown RBP12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 TRAV36DV7A0A075B6V5 113 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 A0A0B4J203 849 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 TCRBV5S2A0A599 114 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 CHEK1O14757 476 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 GALR3O60755 368 aaPredicted RBP12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 DTYMKP23919 212 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 UBE2G1P62253 170 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 SHISA6Q6ZSJ9 500 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 OR8D4Q8NGM9 314 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 NUDT8Q8WV74 236 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 AMDHD1Q96NU7 426 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 CTDSP1Q9GZU7 261 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 ASIC5Q9NY37 505 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 TAS2R4Q9NYW5 299 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 FTSJ1Q9UET6 329 aa12.33□□□□□ -0.44
CCDC144A-203ENST00000360495 E5RGE8 158 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 MAN2B1O00754 1011 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 IQCF3P0C7M6 154 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 MAP2K6P52564 334 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 TMEM201Q5SNT2 666 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 ACSM5Q6NUN0 579 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 DLK2Q6UY11 383 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 CCDC190Q86UF4 302 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 ADGRG3Q86Y34 549 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 PFN4Q8NHR9 129 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 LIPHQ8WWY8 451 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 ASB13Q8WXK3 278 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 APOOQ9BUR5 198 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 NSG2Q9Y328 171 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 ROBO1Q9Y6N7 1651 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 IGKV6D-21A0A0A0MT36 114 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 CA12O43570 354 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 CD3DP04234 171 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 SLC2A1P11166 492 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 POU3F2P20265 443 aaPredicted RBP12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 HSF1Q00613 529 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 LIPNQ5VXI9 398 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 GALNT16Q8N428 558 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 TCTN2Q96GX1 697 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 SHDQ96IW2 340 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 C8orf33Q9H7E9 229 aaPredicted RBP12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 OLFM2O95897 454 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 GLI4P10075 376 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 RABIFP47224 123 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 B3GNT9Q6UX72 402 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 OR51H1Q8NH63 302 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 CCDC74BQ96LY2 380 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 ZNF2Q9BSG1 426 aaPredicted RBP12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 SLC45A1Q9Y2W3 748 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 HMX2A2RU54 273 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 BLACEA4D250 179 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 H3BQ06 376 aaPredicted RBP12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 GLAP06280 429 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 CD63P08962 238 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 HBQ1P09105 142 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 PVRP15151 417 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 P2RY2P41231 377 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 CLDN17P56750 224 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 DSC1Q08554 894 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 IL22RA1Q8N6P7 574 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 SLC35G3Q8N808 338 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 MFSD9Q8NBP5 474 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 ISG20Q96AZ6 181 aaKnown RBP12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 TM4SF18Q96CE8 201 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 LYSMD1Q96S90 227 aa12.32□□□□□ -0.44
CCDC144A-203ENST00000360495 PLSCR5A0PG75 271 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 AQP8O94778 261 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 MMP7P09237 267 aaPredicted RBP12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 RPS15P62841 145 aaKnown RBP12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 ERV3-1Q14264 604 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 DCXRQ7Z4W1 244 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 GHRLQ9UBU3 117 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 FLVCR1Q9Y5Y0 555 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 AQP7O14520 342 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 TAPBPO15533 448 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 TMEM11P17152 192 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 DCTDP32321 178 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 DCAF7P61962 342 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 ARL16Q0P5N6 197 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 FXNQ16595 210 aa12.31□□□□□ -0.44
CCDC144A-203ENST00000360495 NKAIN4Q8IVV8 208 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms